Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02862 AATGGACACAAGTTTTCGCCCACCTCCTTGTGTCTGCTTCATCTGAAACGCCACTATTTCAGCTTTCTCTCTCATTAATAATACTATTACTTTTGTCACTTTTTCTGCTATGGAGTTGGGCAGCATACTCCACTTCCTTCAGGACAAGACCATTTTAATCACTGGAGCAACCGGCTTTCTTGCCAAAGTTTTGCTGGAGAAGATATTGAGGGTCCAACCAAATGTTAAGAAGCTTTACCTTCTTTTAAGAGCTGCAGATGCCAAATCTGCTACTCATCGCTTGCACAATGAGATCATAGGGAAGGACTTGTTTAGGTTACTAAAGGAAAAGTTGGGTGCAAATTTTAATTCATTTGTCTCTACAAAATTGACTCTGGTACCTGGGGATATTTCTCGTGAAGACTTGGGATTGGAGGATTCCATTCTAAGGGAAGAGATTTACGATAAAACAGATGTCATTATCAATTTAGCTGCAACAACAAACTTTGATGAGAGGTACGATATATCGTTGGGCCTTAATACCTATGGTGTTAAGTATGTCATCAACTTCGCCAAAAAGTGTACCTATGTGTGTGGTGAGGGAGGAGAAGGGCTCATATTAGAGAAACCTTATCGATTGGGTGATTCACTGAATGGAGTGCCTGGATTAGACATTAATGCAGAAGAAGAAGTGGTGCGTAACAAATTAAGTGAGCTACGACAACTGGGGCCACTGAAAAGGAAATTAAAGAGGGCAAAGTTGTATGGATGGCCAAATACATATGTATTCACCAAGGCAATGGGAGAGATGCTTGTGGAGCAACTAAAAGGAAACTTGTCAGTTGTGATCATTCGTCCTACCATTGTTACCAGCACTTTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGTGTAAGAACCATTGACAGTTTAGCTGTAGCTTACGGGAAAGGAAAATTAACATGCTTCCTTGGAGATCTCAAAGCAATTGTTGATGCGATACCAGCTGACATGGTGGTGAATGCAATACTTGTGGCAATGGTGGCCCATGCAAATCATCCTAGTGATGATGTTATATATCATGTTGGTTCTTCTGTTAGAAGACCACTAAGATACAGCAATCTTCAAGAATACGGCCTAAGATATTTCACAGCAAAACCGTGGATAAACAAGGATGGAAAACCTGTTAAGGTAGGAAAAGTTACAGTATTGAGCAACATGGATAGCTTCAGAAGATATATGTTCATTCGCTACCTGCTTGTGTTAAAGGGTCTTGAGCTTGCCAATACTGCATTTTGCCAGTATTTCCAAGGAACATATCTTGATCTCAATAGGAAGATCCAGATTGTGATGCGGTTGGTGGACCTTTACAAGCCTTACTTGTTCTTCAAAGCTGCGTTTGATGATATGAACACAGAGAAGTTGCGAATGGCAGCAAGACAAGGAGGGGTGGAGACAGATTTGTTTTATTTTGACCCTGAACTGATAAATTGGGATGATTATTTTTTGAACATCCATCTCCCCGGTGTGGTGAAGTACATTCTCAAGTGATATTGTAATTGAAGTGAGGTATATATAGCTTCAATATTGTTTTAGTGGTGAAGCTGGTATGTTTTTTATGTTCAAATTTGTACTAGAACTAGAAGAGTCACATTATAGTCAAGTTATTTGTTTCTCAATGGCAGTACAAATGTGTTAGCTTGCTGCCAAATATGTTTCAAAACTTCAATCAAGTGTCTTTAAAAAGCAACCATCTTTTATGTAGTTTTTTATCATTTTTAATTTGATTTTTACCATAAGAA 1779 0.3907 MELGSILHFLQDKTILITGATGFLAKVLLEKILRVQPNVKKLYLLLRAADAKSATHRLHNEIIGKDLFRLLKEKLGANFNSFVSTKLTLVPGDISREDLGLEDSILREEIYDKTDVIINLAATTNFDERYDISLGLNTYGVKYVINFAKKCTYVCGEGGEGLILEKPYRLGDSLNGVPGLDINAEEEVVRNKLSELRQLGPLKRKLKRAKLYGWPNTYVFTKAMGEMLVEQLKGNLSVVIIRPTIVTSTFKEPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANHPSDDVIYHVGSSVRRPLRYSNLQEYGLRYFTAKPWINKDGKPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLDLNRKIQIVMRLVDLYKPYLFFKAAFDDMNTEKLRMAARQGGVETDLFYFDPELINWDDYFLNIHLPGVVKYILK 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02862 472 Pfam Male sterility protein 17 299 IPR013120 -
Pste1g02862 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 319 IPR036291 -
Pste1g02862 472 Gene3D - 8 356 - -
Pste1g02862 472 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 472 IPR026055 GO:0080019
Pste1g02862 472 CDD FAR-N_SDR_e 13 343 - -
Pste1g02862 472 Pfam Male sterility protein 374 472 IPR033640 -
Pste1g02862 472 CDD FAR_C 396 471 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02862 Pste-Chr1 12208733 12215717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02862 113 471 Acyl Lipid Metabolism Gene Families AT4G33790 57.256 7.79e-161 458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03056 3 23354038 23362222 Pste1g02862 1 12208733 12215717 PCT