Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02716 GTCATCCTGTTCACTACAATGCCATCATCACTATCCTTTTACTTCCATACGGTTCCTATTATCTCCCTTCTTGTTCTCTCATGTATGATTTGTTCTAGTATTGCTCAGGGACCACCTTCACCTGGCTACTACCCCGGTTCTAAAATCAGTCCTGTTAGCTTTAATCAAGGATTTAGAAACCTTTGGGGACCTCAGCATCAGAGAGTAGACCAAGGCTCATTGACAATATGGCTTGATTCTAGTTCGGGGAGTGGATTCAAGTCACTTCACTCTTATAAATCTGGTTACTTCGGAGCTGCAATTAAGCTTCAACCTGGTTATACTGCAGGAGTCATCACATCACTCTACGTGAGAATTACTCTACAACTTTATCTAATTTTGAAATTTGAATCTCTTCTTTCAAGAATTTTCACGCGATTTTATGTGGATGATGTCCCCATAAGGAGGTATCCTAGGAAAAGTGATGCCACATACCCCTCAAGGCCAATGTATGTGTACGGGTCAATATGGGATGCATCTTCTTGGGCAACAGAGGATGGAAAATACAAAGCTAATTATAAGTACCAACCCTTCATTGGTAGGTACAAAAACTTCAAACTGCAAGGTTGCACCACACAGAGCTCTGCCTCATGCCACCCACCTTCTGGCTCACCATCTGGCTTTGGTAGTCTGAGCCCTCAGCAGTTTAGGGCCATGCAGTGGGTCCAAAACAACTACTTGGTCTACAATTATTGCCATGACCCTAGGAGAGACCACACGCTTATACCAGAGTGCTAG 777 0.435 VILFTTMPSSLSFYFHTVPIISLLVLSCMICSSIAQGPPSPGYYPGSKISPVSFNQGFRNLWGPQHQRVDQGSLTIWLDSSSGSGFKSLHSYKSGYFGAAIKLQPGYTAGVITSLYVRITLQLYLILKFESLLSRIFTRFYVDDVPIRRYPRKSDATYPSRPMYVYGSIWDASSWATEDGKYKANYKYQPFIGRYKNFKLQGCTTQSSASCHPPSGSPSGFGSLSPQQFRAMQWVQNNYLVYNYCHDPRRDHTLIPEC 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02716 258 Gene3D - 34 122 - -
Pste1g02716 258 Gene3D - 134 258 - -
Pste1g02716 258 PIRSF EndGlu_transf 15 122 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste1g02716 258 PIRSF EndGlu_transf 134 258 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pste1g02716 258 Pfam Glycosyl hydrolases family 16 138 187 IPR000757 GO:0004553|GO:0005975
Pste1g02716 258 Pfam Glycosyl hydrolases family 16 55 117 IPR000757 GO:0004553|GO:0005975
Pste1g02716 258 SUPERFAMILY Concanavalin A-like lectins/glucanases 53 116 IPR013320 -
Pste1g02716 258 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 48 118 IPR044791 GO:0004553
Pste1g02716 258 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 223 258 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste1g02716 258 SUPERFAMILY Concanavalin A-like lectins/glucanases 139 258 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02716 Pste-Chr1 10990899 10992695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02716 21 258 Glycoside Hydrolase AT3G44990 48.797 1.68e-83 250
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03139 3 24181116 24183258 Pste1g02716 1 10990899 10992695 PCT