Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02113 ATGTTGGATAGCAACGGTGACGGGAGAATAACGTTGAAGGAGGTGAAGGAGTGGTTGGAGAAATTAGGGATGTTGATCCCGGAGAAGGAGCTGGCGCAGATGATCGACGCCAACGGGGAGGGTTGGCTTGACGTGGATCAGTTTAGGCAATTGTACCAGTCTCTCATGGACATGGAGGAGGAGCACGATGAGGACATGAGAGAGGCCTTCAACATCTTCGACCAGAACCGCGACGGCTTCATCACCGTTGAGGAACTCCACTCCGTCCTCGCCTCCCTCGGCCTCAAACAAGGAACCACCCTTCACCACTGCAAGAACATGATCCTCCAAGTCGACGTCGATGGAGATGGCATGGTATATATGTGGTATTATAGAAACGTGTGTGATGAGCCTATCCTTTCATTCCTCTCCTCTGATCCTTGGTGGTAG 429 0.5198 MLDSNGDGRITLKEVKEWLEKLGMLIPEKELAQMIDANGEGWLDVDQFRQLYQSLMDMEEEHDEDMREAFNIFDQNRDGFITVEELHSVLASLGLKQGTTLHHCKNMILQVDVDGDGMVYMWYYRNVCDEPILSFLSSDPWW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02113 142 SUPERFAMILY EF-hand 1 121 IPR011992 -
Pste1g02113 142 ProSiteProfiles EF-hand calcium-binding domain profile. 1 25 IPR002048 GO:0005509
Pste1g02113 142 SMART efh_1 65 93 IPR002048 GO:0005509
Pste1g02113 142 SMART efh_1 29 55 IPR002048 GO:0005509
Pste1g02113 142 SMART efh_1 1 22 IPR002048 GO:0005509
Pste1g02113 142 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
Pste1g02113 142 Gene3D - 1 58 - -
Pste1g02113 142 Pfam EF-hand domain 65 94 IPR002048 GO:0005509
Pste1g02113 142 Gene3D - 59 121 - -
Pste1g02113 142 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
Pste1g02113 142 FunFam calmodulin-like protein 3 59 129 - -
Pste1g02113 142 Pfam EF hand 1 16 IPR002048 GO:0005509
Pste1g02113 142 ProSitePatterns EF-hand calcium-binding domain. 3 15 IPR018247 -
Pste1g02113 142 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 56 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02113 Pste-Chr1 6653695 6654307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02113 1 119 EF-hand Containing Proteins AT2G43290 60.317 1.13e-46 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03466 3 27253589 27254260 Pste1g02113 1 6653695 6654307 PCT