Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01453 GGAAAATGGAAGAAGGGTTTTAGACTTCACACTAGCTTTGGTCATGACTAATTCTACATCTGTCTTGGCTCTGTCTGTGTTTGCGTGTGCGTCGTGTTTGCGCGTTTGTTTTTCTCTTTCTTTGTTTGTTTTGTTTAAGCCTATAAGGTGACAGTTGGGAAGCAAGTTCAACACTTTTAACTTTTAAGCTTTCCATTACATTCAAACTTCAAACACCCCATCACTTCTCTTCACATGCCTTTACAATAACATAGTAACCAAACACAGATCTGAAACAAAAAAAAAGAAAGAAGAGGATATTGTAATCAGTCTTAGTTGTCAAATATGTCTTCAAAATTGTTTAGAGCAAGCCGATCATCTATATCATCAACATCTGATGCACCTGATGGCCAGAAACCTCCTTTACCTCCAACGGTGCAATTTGGCCGGAGAACTTCCTCTGGTCGCTATGTCAGTTACTCTAGAGATGATCTTGACAGTGAGCTAGGGAGTACTGACTTCATGAACTATACAGTGCACATACCACCTACCCCTGATAACCAACCTATGGATCCGTCAATCTCACAGAAAGTTGAGGAGCAATATGTGTCAAATTCACTCTTCACAGGTGGATTCAACAGTGTTACTCGAGCCCATCTAATGGATAAGGTGATAGAATCTGAAGCAAATCATCCGCAGATGGCTGGTGCAAAAGGATCATCATGTGCAATTCCTGGTTGTGATTCTAAGGTGATGAGTGATGAACGTGGTGCTGATATTCTTCCATGTGAGTGTGGTTTTAAGATATGTAGAGATTGTTATATAGATGCAGTAAAAACTGGTGGCGGGACATGCCCAGGATGCAAGGAGCTATATAAGAACACAGAACTAGATGAAGTGGCTGTAGATAATGGACGTCCCCTTCCACTTCCTCCACCAAGTGGAATGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACGAAGTCAGCATTGATGAGGAGCCAAACTGGAGACTTTGATCATAATCGGTGGCTCTTTGAAACAAAGGGGACTTACGGCTATGGCAATGCTATATGGCCTAAGGAAGGTGCTTTTGAAAAGGAAAACGAGGATGATGGTGTCGATCAGCCAACTGAATTAAGGAGCAGACCCTGGAGACCACTTACAAGGAAACTGAAGATACCTGCTGCTGTTTTGAGCCCCTATCGTCTTATCATCTTTATTCGTTTGGTAGTTTTGGGACTGTTCTTGACATGGAGGATCAAACACCAAAATACTGATGCAGTCTGGCTATGGGGTATGTCTGTTGTTTGTGAGATATGGTTTGCTTTTTCCTGGCTGCTGGATCAGCTGCCCAAACTATGCCCAGTAAATCGATCCACTGATCTTAATGTTCTGAAGGAGAAATTTGAAACACCAACCCCTAACAATCCTACTGGAAAATCTGATCTTCCGGGCGTGGATGTCTTTGTTTCTACTGCTGATCCTGAGAAAGAACCTCCTCTTGTCACTGCAAACACTATCTTGTCTATTTTAGCTGCTGATTACCCTGTTGAGAAGCTTTCATGTTATGTTTCTGATGATGGAGGTGCGCTTCTAACTTTTGAGGCAATGGCTGAAGCTGCCAGCTATGCTAACATGTGGGTTCCCTTCTGTCGTAAACATGATATAGAGCCCAGGAATCCCGAATCATACTTCAACTTAAAAAGAGACCCTTACAAAAACAAAGTGCGACCTGATTTTGTCAAGGATCGTAGACGAGTAAAGCGTGAGTATGACGAATTCAAGGTTAGGATTAATAGTCTGCCTGACTCTATCCGTCGACGGTCTGATGCCTATCATGCAAGAGAGGAAATCAAGGCCATGAAAGTTCAGAGACAAAACAGGGGAGATGAACCTTTAGAAACTGTTAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCAGGAACTTGGTTGACTCCTACATCTGAGCATTCTAAAGGTGACCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGCGATGAACCTCTTTTTGGAAGTGCTGATGATACAAGGCTCATTGACTTGACTGATGTTGATATCCGTCTTCCGCTTCTTGTCTATGTTTCTCGAGAGAAGCGCCCAGGATATGATCACAACAAGAAAGCTGGGGCCATGAATGCCTTGGTTCGAGCCTCAGCTATAATGTCTAATGGCCCTTTTATACTCAATCTTGACTGTGATCACTATATCTACAACTCAAAGGCAATGAGGGAAGGCATGTGCTTTATGATGGACCGTGGAGGTGATCGCATTTGTTATGTCCAATTCCCCCAGAGGTTTGAAGGAATTGATCCATCAGATAGATATGCTAACCATAATACTGTCTTCTTTGATGTCAATATGCGAGCCCTTGATGGACTTCAAGGACCAGTCTATGTGGGAACTGGATGCCTTTTCAGACGAATTGCTCTCTATGGTTTTGACCCGCCCCGTTCTAAAGAGCACAACACAGGTTGTTGTAATTGCTGCTTTGGTCGTCAGAAGAAACATGCATCAATGGCAAGCACCCCAGAAGAGAACCGTGCACTGAGGATGGGCGATTCTGATGAGGAGGAAATGAATCTATCACTGTTCCCTAAGAAGTTTGGAAACTCAACTTTCCTCATAGACTCAATTCCAGTGGCAGAGTTCCAAGGCCGGCCTCTAGCAGATCACCCTGCTGTGAAAAATGGACGTCCACCTGGTGCTCTCACCATACCCCGTGATCTTCTTGATGCATCAACTGTTGCAGAGGCCATCAGTGTTATCTCCTGTTGGTATGAGGACAAGACTGAGTGGGGAAATCGCGTTGGATGGATCTATGGATCTGTGACAGAAGATGTAGTCACTGGCTATAGGATGCACAATAGAGGATGGAAATCCGTTTACTGTGTGACAAAGCGTGATGCCTTCCGGGGAACTGCTCCCATCAATCTCACTGACAGGCTGCATCAGGTTCTTAGATGGGCTACCGGGTCAGTTGAAATATTCTTCTCTCGAAACAATGCACTACTGGCTAGCCCAAGAATGAAAGTTCTTCAAAGAATTGCTTACCTTAATGTTGGAATCTACCCTTTCACATCCATATTCCTAATAGTCTACTGCTTCCTTCCTGCACTGTCCCTCTTTTCTGGCCAGTTCATTGTTCAAACCCTTAATGTCACTTTTCTTTCATATCTCTTGGGCATCACTGTGACCTTGTGCATGCTTGCAGTGCTGGAAATTAAGTGGTCTGGCATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACCAGTGCCCATCTAGCTGCTGTGCTTCAAGGTTTGCTCAAGGTCATAGCAGGGATTGAAATCTCATTCACCTTGACTTCAAAATCTGCTGGTGATGATTTAGATGATGAGTTTGCTGATCTTTATATTGTCAAATGGACATCCCTTATGATACCACCTATCACAATTATGATGGTTAACTTAATAGCTATAGCAGTTGGAGTCAGCAGAACCATATACAGTGTCATACCACAGTGGAGCCGTCTAATAGGTGGTGTTTTCTTCAGTTTTTGGGTCTTGGCTCATCTTTATCCCTTTGCAAAAGGTTTGATGGGTAGAAGAGGGAGGACACCTACCATAGTTTTTGTATGGTCAGGCCTCATAGCAATCACAATTTCTCTCCTCTGGGTGGCTATCAACCCTCCTGCTGGTACTAACCAGATTGGGGGTTCATTCCAGTTCCCATGATAGGACATTCTTTTTGTCACAGATTAATCTGTCAGCAATTTTTTTATTTATATTTAGTTTTTTTCTTCATTGATGCTACTAATGAATGCACTTAAATTATGTTGCCTATTGTGCTTATGAATTTTGATTAGAACTTAATTCCAGAAATGTTATAATATTTTAGCTTTCTGATGACCAAGCCAAGGCTTTCTGTAGCAGACCCTTTTTTTCTTCTGTTACATAAATTATCATTTGGCTTCAAGTTTGAGAAATATTTCTGAAAACAATGATTTTTTATCAATCTTTTTCTATCCAAG 4055 0.4252 MSSKLFRASRSSISSTSDAPDGQKPPLPPTVQFGRRTSSGRYVSYSRDDLDSELGSTDFMNYTVHIPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGADILPCECGFKICRDCYIDAVKTGGGTCPGCKELYKNTELDEVAVDNGRPLPLPPPSGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGAFEKENEDDGVDQPTELRSRPWRPLTRKLKIPAAVLSPYRLIIFIRLVVLGLFLTWRIKHQNTDAVWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPNNPTGKSDLPGVDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASYANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKVQRQNRGDEPLETVKIPKATWMADGTHWPGTWLTPTSEHSKGDHAGIIQVMLKPPSDEPLFGSADDTRLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKEHNTGCCNCCFGRQKKHASMASTPEENRALRMGDSDEEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGNRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKVLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDLDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSFQFP 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01453 1144 MobiDBLite consensus disorder prediction 1 21 - -
Pste1g01453 1144 FunFam cellulose synthase-like protein D3 579 716 - -
Pste1g01453 1144 FunFam Cellulose synthase-like protein D3 110 192 - -
Pste1g01453 1144 Pfam Cellulose synthase 374 1135 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste1g01453 1144 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 582 715 IPR029044 -
Pste1g01453 1144 MobiDBLite consensus disorder prediction 1 44 - -
Pste1g01453 1144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Pste1g01453 1144 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Pste1g01453 1144 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 273 1120 - -
Pste1g01453 1144 SUPERFAMILY RING/U-box 116 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01453 Pste-Chr1 4582438 4587823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01453 2 1144 Glycosyltransferase AT3G03050 84.160 0.0 2026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00798 1 2484420 2485983 Pste1g01453 1 4582438 4587823 ECH
Pste1g01453 1 4582438 4587823 Pste1g01453 1 4582438 4587823 ECH