Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00798 ATGGAACACACGGACCCAGGGACCAAAACTGATTGGGGACAGCGTGTTGGATGGATCTATGAGTCAGTTACTGAGGATGTGGTTACTGGCTATAGGATGCATAATAGAGGATGGAAATCAGTTTACTGTGCTATCAAGCGCGATGCATTCCGTGGAACTGCTCCCATCAAAATGATAGGCTGCATCAGGGGGGTGGGGCATAAATCCTTCCCTTCTCTCATCAAAGACTTGAGAGGTTTGTATAAACCTTCCATTTTGATTGTAATTGAGCCTAGGATCAGTGGGAGTGCAGCAGCTAAAGTTCGTAGAAATCTGGGTCTTCCGTTGAGGCTGTGGGTTTCGTTGGTGGCATTTGGATGCTCTAGAATACTGATTATTTTGATATCCAAGTTGAGGTGTCAAGTGATCAGGTTATCCATTCCAAAGTTATTCCGGCGGATGTTCATCTCCCTGGTGGTTGTCTGCTGTTTATGGATCCCCGAGGGGTCATTCAAAGGGGTTGTTTCTTCTTCCTGGACCCAAGGAGTGAATTGGCTGCAAGGTGTGGAAGAGTTCCAAGGGAAAGCGAGGGATTGGAATCGAAACTGTTTTGGGAATATATTCCATAAAAAGAGGAGACTAATTGCTTGCATGGAGGGCATAGACAGGAAACTTGGCACACACCAGGACACTGATCTCCTCCACTTGAGAAGAAAGCTCTGGAGAGAATACCAAATCATTCTGCAGCAGTAG 732 0.4617 MEHTDPGTKTDWGQRVGWIYESVTEDVVTGYRMHNRGWKSVYCAIKRDAFRGTAPIKMIGCIRGVGHKSFPSLIKDLRGLYKPSILIVIEPRISGSAAAKVRRNLGLPLRLWVSLVAFGCSRILIILISKLRCQVIRLSIPKLFRRMFISLVVVCCLWIPEGSFKGVVSSSWTQGVNWLQGVEEFQGKARDWNRNCFGNIFHKKRRLIACMEGIDRKLGTHQDTDLLHLRRKLWREYQIILQQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00798 243 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 48 IPR029044 -
Pste1g00798 243 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 9 58 - -
Pste1g00798 243 Pfam Cellulose synthase 9 59 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00798 Pste-Chr1 2484420 2485983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00798 9 58 Glycosyltransferase AT3G03050 84.000 8.28e-24 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00798 1 2484420 2485983 Pste1g01453 1 4582438 4587823 ECH
Pste1g00798 1 2484420 2485983 Pste1g00798 1 2484420 2485983 ECH