Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01002 ATGTTGGACGGATGTTCCTGCATTGTTCCGAGGTTGTTTTCTAGCACTTGCCAGGCAGAGAACGACTGGTCTTACATGAAGTGCTTGCTGGACTTGGACATTAAGAATGGTAAGCGCCCTATGGAGATTGATGATGTTGAGGATGAGCCCCAGCAGCCTAGAAAGTGTACTAAGAAGATGGATTCTTGCCATAGGGAGGAAATGACTCAAATTTCGTTTCAACGACAATCTATCAAGGTTGAGGATTCTGTTGTTCCCCCAGTGGATCAGGAGACCATTTGGTCATTGAGTACTTGTCAAGGAGTTGTTGGAGAAGAGAGAGCTTTGAATAACGGGCTATCGAGCAAGCAAGAACAGGAGGCTGATGGTGACTTGATGGATTTTGGTGACCATCAATCTGAAAAACAGCAGCAGGATCATTTGGAGGATTCATCAGATTTTGGTGTTCAACTATCTGATGAAGATCAATTGCAGCATGATGAGAATTTATTGAATTTGAGTGTGCAGCAATCTGAGGGACAGCAACAGAATCACAGTGGGGATTCTTCAGATTCTGGTTCTCTCTTGCCACGAATGAACCGTGACATCTCAATCGCCTGTCTCAGCCGCTGTTCAAGGTCAGATTATGGTTATCTTGCCTCGTTGAATAGGAGCTTCCGGAACATAATCCGAAGTGGTGAGCTCTACCAATGGAGAAGGCTTAATGGGATTATGGAGCACTGGATTTATTTTTCTTGTGCCCTCCTCGAATGGGAGGCCTATGATCCAATTCGTCAGCGGTGGATGCATTTACCAAGGATGGCTTCTAATGACTGCTTCATGTGTTCAGATAAGGAATCTTTAGCTGTAGGTACTGAGCTTCTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTCTTGACAAACTCATGGACATCTGGAATGAGGATGAATGCTCCAAGATGCTTGTTTGGCTCAGCAAGCCTTGGAGAGGTTGCTATATTAGCTGGTGGGTGTGATTCAGAGGGGCACATCCTTCACTCTGCTGAATTGTATAATTCTGAGACTCAAACATGGGAAACACTCCCAAGTATGAAAAAACCCAGGAAAATGTGTTCTGGGACTAGGACATGGACTGAGATTCCTAACATGTCTCCCGGACGAAGTAGTAGGGGTCCTGAGATGCCTGCAACAGCTGAGGCACCACCTCTTGTTGCTGTTGTAAATGATGAACTGTATGCTGCTGATTATGCTGATATGGAGGTTAAGAAGTATGACAAGGAGAGAAAATCGTGGCATAGCATTGGGAGACTACCGGAGCGTGCAGTGTCGATGAATGGTTGGGGTCTTGCATTCAGGGCATGTGGAGATAAGCTTGTTGTTATTGGTGGACCTAGGACTCACGGTGAGGGTTTTATTGAACTCAATTCATGGGTGCCTAGTGAAGGACCTCCACAGTGGGATCTACTTGCTAGAAAACGTTCTGGCAACTTTGTCTATAATTGTGTTGTGATGGGATGCTGA 1518 0.4545 MLDGCSCIVPRLFSSTCQAENDWSYMKCLLDLDIKNGKRPMEIDDVEDEPQQPRKCTKKMDSCHREEMTQISFQRQSIKVEDSVVPPVDQETIWSLSTCQGVVGEERALNNGLSSKQEQEADGDLMDFGDHQSEKQQQDHLEDSSDFGVQLSDEDQLQHDENLLNLSVQQSEGQQQNHSGDSSDSGSLLPRMNRDISIACLSRCSRSDYGYLASLNRSFRNIIRSGELYQWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNDCFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEVAILAGGCDSEGHILHSAELYNSETQTWETLPSMKKPRKMCSGTRTWTEIPNMSPGRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERKSWHSIGRLPERAVSMNGWGLAFRACGDKLVVIGGPRTHGEGFIELNSWVPSEGPPQWDLLARKRSGNFVYNCVVMGC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01002 505 Gene3D - 373 480 IPR015915 GO:0005515
Pste1g01002 505 SMART kelc_smart 286 329 IPR006652 GO:0005515
Pste1g01002 505 SMART kelc_smart 330 377 IPR006652 GO:0005515
Pste1g01002 505 MobiDBLite consensus disorder prediction 169 189 - -
Pste1g01002 505 MobiDBLite consensus disorder prediction 120 142 - -
Pste1g01002 505 Gene3D - 234 372 IPR015915 GO:0005515
Pste1g01002 505 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 180 372 - -
Pste1g01002 505 MobiDBLite consensus disorder prediction 110 146 - -
Pste1g01002 505 MobiDBLite consensus disorder prediction 374 395 - -
Pste1g01002 505 SUPERFAMILY Kelch motif 248 502 IPR015915 GO:0005515
Pste1g01002 505 Pfam Kelch motif 318 363 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01002 Pste-Chr1 3192693 3194298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01002 195 360 EF-hand Containing Proteins AT4G39560 26.519 1.66e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01002 1 3192693 3194298 Pste1g01002 1 3192693 3194298 ECH
Pste1g01002 1 3192693 3194298 Pste6g02539 6 12647631 12649945 PCT