Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00524 CATGAAATGAAAGCAAGAGGAAGCACTTGGACTTGGGTCCTGTCCTCCTCACCACAGCTCACACAACCTTTGGGGGTTGGTGGCTGCCTGCGTGTATCCTAATATTATTATTATATATATTTATGCTAAGTTCCCAACACTTCCCATGTGAGTCACCCTCCTCACTACTCTCTCTCTCTTTCTCTCCCATCCTTCTACTCTCTTCGCACTTCACATTCCATCAACACCGAAATGGCAAACAACGTCGGCATTCTCGCAATTGACATCTACTTCCCTCCCGCTTGCGTTCAACAGGAAGCGTTGGAGACTCATGATGGTGCCAGTAAAGGAAAATATACCATTGGACTTGGACAAGATTGCATGTCGTTCTGTACCGAAGTAGAAGATGTCATCTCAATGAGTGAGACTGTGATAGACAAAAGCAAATCCATCAAGACATTCCTGATGCAGATCTTTGAGAAATATGGAAATACTGACATTGAGGGTGTTGATTCAACTAATGCATGCTATGGAGGAACTGCTGCTCTGTTAAATTGTGTCAATTGGGTGGAGAGCAATTCATGGGATGGACGCTATGGACTTGTTGTCTGCACTGACAGTGCAGTTTATGCTGAAGGACCTGCTCGACCCACTGGAGGAGCTGCTGCTATTGCCTTGCTAATTGGTCCTGATGCACCCATTTCTTTTGAAAGTAAATTGAGAGGAAGTCATATGTCTCATGTTTATGATTTTTACAAGCCTAATCTTGCTAGTGAATATCCAGTTGTCGATGGAAAGCTTTCACAAACTTGTTACCTCATGGCTCTTGATTCTTGCTATAAGCATTTCTGTCACAAGTATGAGAAATTCGAGGGAAAACAATTTTCTCTTTCTGATGCGGATTACTTTGTATTTCACTCTCCTTATAACAAGCTTGTACAAAAGAGTTTTGCTCGGTTGTTTTTCAATGACTTCTTGAGGAATGCCAGCTCTGTGGATGAGGTTGCCAAAGAAAAGCTGGGACCTTTTGCAACTTTATCCAGTGATGAGAGCTACCAAAGCAGGGATCTTGAAAAGGCATCCCAGCAAGTTGCAAAGCCTCTATATGATGAGAAGGTACAACCGACTACTTTGATTCCAAAGCAAGTAGGCAACATGTATACTGCGTCTCTCTATGCAGCATTTGCATCCCTTATTCACAACAACCACAGCACATTGGCACGTAAGAGGGTGATATTATTCTCATACGGAAGTGGCTCAACTGCCACAATGTTTTCTTTGCGATTACAAGACGGTCGACACCCATTTAGCTTGTCAAACATTGCCAGTGTGATGAATGTTGATCGAAAATTGAAGTCAAGGCAGGAGTTTCCTCCGGAGGAGTTTGTTGAAACCCTGAAGCTAATGGAGCATAGGTATGGTGCGAAGGAATTTGTGACAAGCAAGGATAGTAGCCTTTTAGCTCCAGGCACATTCTATCTCACTGAAGTTGACTCCTTGTATCGGAGATTCTATTCAAAGAAGGCTAAAGAAAGCAGTTTGACTCCCGTTGTGAACGGTGTGGCTGCTAATGGGCATGCTAATGGCCACTGAAGTTGAGCCTGCGCAATGAGTGACTAGTCAACTTTGCCTAGAATGAAGTGTATTGTTATTTGCGATAGTTCTGTAGGTAAATCTGGCCACCAGTGTTCTCGCTTCAATACTTTCTTAAGATGTAGCCTAGCTAGTTACTCAGATCTAAATTTTATACTTTTCTGTATTTTTTATTTTATTGAATGAAATTAGTCTTTGTCTCTTTGAATAAAACAATGAAATGCATTATTTATCACATGACATGGTTGGGCTCAGTTAAAATTT 1836 0.4188 MANNVGILAIDIYFPPACVQQEALETHDGASKGKYTIGLGQDCMSFCTEVEDVISMSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIALLIGPDAPISFESKLRGSHMSHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHFCHKYEKFEGKQFSLSDADYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEVAKEKLGPFATLSSDESYQSRDLEKASQQVAKPLYDEKVQPTTLIPKQVGNMYTASLYAAFASLIHNNHSTLARKRVILFSYGSGSTATMFSLRLQDGRHPFSLSNIASVMNVDRKLKSRQEFPPEEFVETLKLMEHRYGAKEFVTSKDSSLLAPGTFYLTEVDSLYRRFYSKKAKESSLTPVVNGVAANGHANGH 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00524 446 SUPERFAMILY Thiolase-like 4 147 IPR016039 GO:0016746
Pste1g00524 446 CDD init_cond_enzymes 4 343 - -
Pste1g00524 446 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 1 424 - -
Pste1g00524 446 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 150 424 IPR013746 GO:0004421|GO:0006084|GO:0010142
Pste1g00524 446 NCBIfam hydroxymethylglutaryl-CoA synthase 57 424 IPR010122 GO:0004421|GO:0008299
Pste1g00524 446 SUPERFAMILY Thiolase-like 151 422 IPR016039 GO:0016746
Pste1g00524 446 Gene3D - 1 426 IPR016039 GO:0016746
Pste1g00524 446 FunFam 3-hydroxy-3-methylglutaryl coenzyme A synthase 56 425 - -
Pste1g00524 446 ProSitePatterns Hydroxymethylglutaryl-coenzyme A synthase active site. 80 95 IPR000590 GO:0004421|GO:0008299
Pste1g00524 446 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 58 149 IPR013528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00524 Pste-Chr1 1676685 1682985 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00524 1 1676685 1682985 Pste1g00524 1 1676685 1682985 ECH
Pste6g01702 6 7575541 7581019 Pste1g00524 1 1676685 1682985 PCT