Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5886 ATGAACCGCCTCCTCTCCTTCCTCTTCCATCAGGGTGTATTGGATGAGCAATTCTTGCAGCTCCAGCAACTACAAGATGAGACATCACCAAACTTTGTCTCTGAGGTTGTCAACATATATTTTCATCAGTCCGAGAAGCTTCTTAGGAATCTCAGAACATTGCTGATAGAGAGAGAGTTAATGGATTATAAGAAAATGGGGATTGATTTGAATCAGTTTATGGGTAGCAGTTCAAGCATTGGTGCAAAAAGAGTGACTAATGTTTGCATTGCCTTTCGTGTCGCAACTGAACAAAACAACCGTGCCGGATGCTTCCGGGCATTAGAAATGCTAGAACATGAATATTGCTATCTCAAGAACAAATTGCACGAACTATTCCAAATTGAACAGCAACGTGCATTGGCAGCTGGAGTGAGGTATCCAGTACAGAATGAATAA 438 0.4155 MNRLLSFLFHQGVLDEQFLQLQQLQDETSPNFVSEVVNIYFHQSEKLLRNLRTLLIERELMDYKKMGIDLNQFMGSSSSIGAKRVTNVCIAFRVATEQNNRAGCFRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQNE* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5886 145 Gene3D HPT domain 1 144 IPR036641 GO:0000160
Psa7g5886 145 PANTHER - 1 140 IPR045871 GO:0000160|GO:0009927|GO:0043424
Psa7g5886 145 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 140 - -
Psa7g5886 145 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5886 Psa-Chr7 485962727 485964372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5886 K14490 - gmx:100789608 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5886 7 485962727 485964372 Psa7g5886 7 485962727 485964372 ECH
Psa5g6959 5 570780759 570781968 Psa7g5886 7 485962727 485964372 PCT