Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6959 ATGCTTGGTTTGGGTGCCGACCTTTTGTGGGCCGACATGAATCGTCTCCTCGCCTTTCTCTTCCATCAGGGAGTTCTCGATGAACAGTTTTTGCAGCTTCAACAGCTTCAAGATCACACTTCTCCTAACTTCGTCTCCGAAGTAGTTAACATTTACTTTCACGAGTCGGAGAAACTACTCACCAATCTCAGATCATTGCTAATGGAGAGGGAGTTTTCGGATTATAAGAAAATGGAAATACATTTGAATCAATTCATTGGTAGCAGCTCAAGCATTGGTGCTAAGAGAGTTACAAGCATCTGCATTGCCTTTCGTGCCGCTTCCGAGCAAGACAACCGTGCTGGATGTTTGCGAGCGTTGGAGATGTTGGAGCATGAATATTGCTATCTTAAGAATAAATTGCATGAACTTTTCCAAATAGAGCAACAACGTGCTTTGGCAGCAGGAGTGAGATATCCTGTGCAGCATCAATAA 474 0.4367 MLGLGADLLWADMNRLLAFLFHQGVLDEQFLQLQQLQDHTSPNFVSEVVNIYFHESEKLLTNLRSLLMEREFSDYKKMEIHLNQFIGSSSSIGAKRVTSICIAFRAASEQDNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPVQHQ* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6959 157 Gene3D HPT domain 4 156 IPR036641 GO:0000160
Psa5g6959 157 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 143 IPR036641 GO:0000160
Psa5g6959 157 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 152 - -
Psa5g6959 157 Pfam Hpt domain 47 117 IPR008207 GO:0000160
Psa5g6959 157 PANTHER - 1 152 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6959 Psa-Chr5 570780759 570781968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6959 K14490 - gmx:100777831 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6959 5 570780759 570781968 Psa5g6959 5 570780759 570781968 ECH
Psa5g6959 5 570780759 570781968 Psa7g5886 7 485962727 485964372 PCT