LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g5839	ATGTTACGGAGACTCATCTCTTCACAACTCAAAACCCTAACTTCTTCTTCGTCTCCTCTCCGATCTCCTTCTCCCGCCGTCGCCGTTTCTTTGCTCTCCTGCCACTTCTCCACCCAATCCGATGACAGTACTGTTGTTAAAAAGAAGGTTGAGGATATAGTGCCGATTGCTACTGGTCATGAACGTGAGGAGCTTCAGGCTCAGATTGAGGGTAGGGATATTCTTGAAATCGACCACCCTGAAGGTCCTTTCGGCACCAAGGAAGCACCGGCTGTTGTGAAATCTTACTACGATAAAAGGATAGTTGGATGTCCAGGTGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAACCTCATGAATGTCCTGTGTGTGCACAGTATTTTGTGCTCGAAGTGGTAGGACCTGGTGGACCGCCTTATGGACACGGTGATGATCATCATCACTAA	468	0.4829	MLRRLISSQLKTLTSSSSPLRSPSPAVAVSLLSCHFSTQSDDSTVVKKKVEDIVPIATGHEREELQAQIEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGPPYGHGDDHHH*	156

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g5839	155	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	34	-	-
	Psa7g5839	155	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	155	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Psa7g5839	155	CDD	Cyt_c_Oxidase_Vb	47	140	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Psa7g5839	155	Gene3D	Cytochrome c oxidase, subunit Vb	46	140	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Psa7g5839	155	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	155	-	-
	Psa7g5839	155	Pfam	Cytochrome c oxidase subunit Vb	57	143	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Psa7g5839	155	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	45	144	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Psa7g5839	155	SUPERFAMILY	Rubredoxin-like	47	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g5839	Psa-Chr7	484539860	484545021	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g5839	K02265		-	gmx:100780886	219.935

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g5839	7	484539860	484545021	Psa5g6915	5	569080613	569088085	ECH
	Psa7g5839	7	484539860	484545021	Psa7g5839	7	484539860	484545021	ECH