Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6915 ATGGCTGTCATTGAGCCACCTATTGGTAGCGGTGTCGAGCATACAAAAGAAGGTTTTGGCGCTAGGAATGAGACACTTAGGAAGCAACTGGCTCAACCCAAATTTCATAGCCACCAAGTTTGTCGCCACGTCGCCACACAATCAGCTGCTTCGGTCAAAAAGAGAGTCGAAGATGTAGTGCCAATTGCTACTGGTCATGAACGTGAGGAGATTCAGGCTGAACTTGAGGGGAGGAATATTCTTGAAATAGACCATCCAGAAGGTCCTTTTGGCACTAAGGACGCACCTGCTGTTGTTAGGTCTTTCTATGACAGAAGGATAGTTGGATGCCCAGGTGGTGAAGGCGAGGATGAGCACGATGTTGTCTGGTTTTGGCTTGAGAAAGGCAAGCCCCATGAATGTCCAGTTTGTACACAGTATTTTGAGCTTGAAGTGGTGGGACCTGGCGGTGATCCTTATGGACACCATTAA 471 0.4798 MAVIEPPIGSGVEHTKEGFGARNETLRKQLAQPKFHSHQVCRHVATQSAASVKKRVEDVVPIATGHEREEIQAELEGRNILEIDHPEGPFGTKDAPAVVRSFYDRRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFELEVVGPGGDPYGHH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6915 156 CDD Cyt_c_Oxidase_Vb 51 148 IPR002124 GO:0005740|GO:0005751|GO:0006123
Psa5g6915 156 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 26 155 - -
Psa5g6915 156 SUPERFAMILY Rubredoxin-like 52 149 - -
Psa5g6915 156 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 50 150 IPR002124 GO:0005740|GO:0005751|GO:0006123
Psa5g6915 156 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 26 155 IPR002124 GO:0005740|GO:0005751|GO:0006123
Psa5g6915 156 Gene3D Cytochrome c oxidase, subunit Vb 52 146 IPR036972 GO:0005740|GO:0005751|GO:0006123
Psa5g6915 156 Pfam Cytochrome c oxidase subunit Vb 62 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6915 Psa-Chr5 569080613 569088085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6915 K02265 - gmx:100801050 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5839 7 484539860 484545021 Psa5g6915 5 569080613 569088085 ECH
Psa5g6915 5 569080613 569088085 Psa5g6915 5 569080613 569088085 ECH