Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5803 ATGTCTGCTTCACTGCCTCCTAAAGAGGGCAACCTCTTCAAGCTTATTGTTAAATCATACGAGACCAAGCAATATAAAAAAGGCATCAAGGCAGCTGATGCTATTTTGAAAAAATTCCCGGACCATGGAGAAACTTTATCAATGAAGGGTTTAACATTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGGTCAGACAGAGAATACAGGGAGGCAATCAAGTGCTACCGAAATGCCCTGAGAATAGATCCTGATAATATTGAAATTCTGCGTGATTTGTCACTCTTACAGGCTCAAATGAGAGATTTATCTGGCTTTGTTGAGACTAGACAACAACTTTTGACTCTTAAGCCAAATCATCGCATGAACTGGATTGCCTTTTCTGTTGCCCATCATTTAAACTCTAATGCGTCCAAGGCTGTGGAAATTTTGGAAGCATATGAAGGGACTTTAGAAAATGATTATCCTCCAGATAATGAACGGGTCGAGCATGTGGAAATGATTTTGTATAAGATCTCTTTGTTAGAGGAATGCGGATTTCTTGATAAAGCTCTTGAAGAGTTACGCCAAAACGAATCGAAAATTGTTGATAAACTTGCTTTTAAAGAACAAGAGGTTTCACTTGTAGTGAAGCTTGGTCATTTAGAAGAAGCAGAATCGTTGTACAGGATATTACTTTCCATGAATCCTGATGATTATAGTTACTATGAGGGTCTTCAAAAGTGTGTTGGTTTGTATTTAGAAGATGGGAAGTACTCTGCCGATCAAATAGATCAGTTAGTTTCATTGTATGAAACACTTGGGCAACAATATAAGTGGTCTTCTGCAGTAAAGAGAATACCCCTGGATTTCTTACAAGGTGACAAGTTTCGAGAAGCTGCAGAAAATTATATTAGGCCTCTCTTAACTAAGGGAGTTCCATCTCTGTTTTCTGATCTTTCTTCTCTGTACAATCATCCTGGGAAGGCAGACATTTTGGAACAACTTATTCTTGAGTTAGAGCATTCAATTAGGACATCAAGCCAATATCCTGGGTGTACGGAGAAAGAACCCCCTTCAACTCTTTTGTGGACTTTGTTTTTCTTGGCTCAGCATTATGAGAGGCGCAGCCAATATGCGATTTCTCTTTCTAAAATCGACGAGGCTATAAAACATACACCTACTGTCATCGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGAATGCTGCTGCTGCATTTGCAGATGAAGCAAGGCGTATGGATCTTGCTGACCGTTATGTTAATAGTGAATGTGTTAAGCGGATGCTGCAGGCTGATCAGGTGGCTTTGGCAGAAAAAGTTGCTGTGTTGTTCACAAAAGATGGGGATCAGCATAACAACCTTCATGATATGCAATGCATGTGGTATGAGCTTGCCTCAGGTGAAAGCTTTTTCCGCCAGGACAATCTTGGGCGGGCTCTCAAAAATTTTTTAGCAGTGGAGAAGCATTATGCCGATATTACTGAGGACCAATTTGATTTTCATACATACTGCTTAAGGAAAATGACATTGCGCACTTATGTTAAAATGCTTAAATTTCAAGATCAATTGCACTCACATGCATATTTTCACAACGCAGCAGCTGGAGCTATCAAATCTTATATAAAGTTGCATGATTTTCCCCCAAAGTCTACAACAGAGGAAGATGAGCATATGTCAAACTTGCTTCCTTCTCAAAAAAAGAAATTGCGACAAAAGCAAAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAGAATGAAGAATTAAATCCTAGCACGGTATCAAAGTCTGGGAAGCGGAATGTAAAACCTGTTGATCCTGATCCACATGGGGAGAAGTTATCGCAGGTTGAAGATCCACTGTCCGAAGCTGTTAAATACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCATTGGAAACACATTTGCTCTCTTTTGAATTATATACAAGAAAACGGAAGATTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTACTGAGATTGGATACTGATCACCCTGATTCTCATCGTTGCTTGATTAAATTTTTCCATCAATTCGGATCCATGGGTTCTCCTATGACTGAAAGCGAGAAACTGATATGGAGTGTCTTAGAAGCTGAGCGCCCAACTATTAGTCAGCTGCATGAGAAATCTCTTTTTGATGCAAACAATGCTTTCCTTGACAATCATAAAGATTCTTTGATGCATATAGCAGCTTTTGCAGAAACCTTGTATATTTTGGATTCTAACAGAAAGTCTGAGGCTGTCAAGTTGATTGAAGAGTCAGCAAATAATATTGTACCCAGAAATGAAGCAATCGGACCAATTGGAAAGTGGAAACTTAAAGACTGTATTGCAGTTCACAAGCTTCTTGGAACATTACTTGTTGACCAAGATGCGGCATTGAGGTGGAAAGTGTGGTGTGCAGAGTATTTCCCTTATTCAACTTACTTTGAGGGAGAACACAGCTCTGCCTCTCCCAACTCGGCCTTTAATCAGTTACGCAAGAACTCTGAAAATGTTAGTCCTAACAATGCAGTTGATAATCAAAATGTGGGCTCTGCCACATCGAATGGAAAAGCATTTCAAAATCTCACTATCTGA 2700 0.3952 MSASLPPKEGNLFKLIVKSYETKQYKKGIKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIAFSVAHHLNSNASKAVEILEAYEGTLENDYPPDNERVEHVEMILYKISLLEECGFLDKALEELRQNESKIVDKLAFKEQEVSLVVKLGHLEEAESLYRILLSMNPDDYSYYEGLQKCVGLYLEDGKYSADQIDQLVSLYETLGQQYKWSSAVKRIPLDFLQGDKFREAAENYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELEHSIRTSSQYPGCTEKEPPSTLLWTLFFLAQHYERRSQYAISLSKIDEAIKHTPTVIDLYSVKSRILKHAGDLNAAAAFADEARRMDLADRYVNSECVKRMLQADQVALAEKVAVLFTKDGDQHNNLHDMQCMWYELASGESFFRQDNLGRALKNFLAVEKHYADITEDQFDFHTYCLRKMTLRTYVKMLKFQDQLHSHAYFHNAAAGAIKSYIKLHDFPPKSTTEEDEHMSNLLPSQKKKLRQKQRKAEARAKKEAEEKNEELNPSTVSKSGKRNVKPVDPDPHGEKLSQVEDPLSEAVKYLKLLQKNSPDSLETHLLSFELYTRKRKILLAFQAVKQLLRLDTDHPDSHRCLIKFFHQFGSMGSPMTESEKLIWSVLEAERPTISQLHEKSLFDANNAFLDNHKDSLMHIAAFAETLYILDSNRKSEAVKLIEESANNIVPRNEAIGPIGKWKLKDCIAVHKLLGTLLVDQDAALRWKVWCAEYFPYSTYFEGEHSSASPNSAFNQLRKNSENVSPNNAVDNQNVGSATSNGKAFQNLTI* 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5803 899 Pfam TPR repeat 84 123 - -
Psa7g5803 899 Pfam N-terminal acetyltransferase A, auxiliary subunit 186 696 IPR021183 -
Psa7g5803 899 Gene3D - 2 503 - -
Psa7g5803 899 PIRSF NAT_A 1 818 IPR021183 -
Psa7g5803 899 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Psa7g5803 899 MobiDBLite consensus disorder prediction 581 649 - -
Psa7g5803 899 MobiDBLite consensus disorder prediction 633 649 - -
Psa7g5803 899 SMART tpr_5 77 110 IPR019734 GO:0005515
Psa7g5803 899 SMART tpr_5 43 76 IPR019734 GO:0005515
Psa7g5803 899 SMART tpr_5 380 413 IPR019734 GO:0005515
Psa7g5803 899 SUPERFAMILY TPR-like 21 262 IPR011990 GO:0005515
Psa7g5803 899 SUPERFAMILY TPR-like 234 452 IPR011990 GO:0005515
Psa7g5803 899 Gene3D - 504 723 - -
Psa7g5803 899 Coils Coil 596 620 - -
Psa7g5803 899 PANTHER BNAC02G23120D PROTEIN 10 879 - -
Psa7g5803 899 MobiDBLite consensus disorder prediction 606 622 - -
Psa7g5803 899 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 879 - -
Psa7g5803 899 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5803 Psa-Chr7 483865406 483884329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5803 K20792 - gmx:100820094 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5803 7 483865406 483884329 Psa7g5803 7 483865406 483884329 ECH
Psa5g6884 5 566413329 566425858 Psa7g5803 7 483865406 483884329 PCT