Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6884 ATGGGTGCTACTCTTCCTCCCAAAGAGGCTAACCTCTTCAAACTCATTGTGAAATCCTATGAAACCAAACAATACAAAAAGGGTCTCAAAGCAGCCGATGCCATTTTGAAAAAATATCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAATCTGAAGCATATGAACTGGTTCGCCAAGGATTGAAGAATGACCTTAAGAGTCATGTTTGCTGGCATGTTTATGGTCTTCTCTATCGGTCGGACAGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTAAGGATAGATCCTGACAATATTGAAATCTTACGTGACCTATCTCTCTTACAGGCTCAAATGCGAGATTTAGCTGGCTTTGTTGAGACAAGGCAACAACTTCTGACTCTCAAGTCAAATCATCGCATGAACTGGATTGGATTTGCTGTTTCACATCATTTGAACTCTAATGCATCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGATTGAGCATGGCGAAATGCTTTTATACAAGGTCTCATTGTTAGAGGAATGTGGATTTTTTGAGAGAGCTTTTGAGGAATTGCAGAAGAAGGAGTCAAAAATTATTGATAAGCTTGGGTATAAGGAACAAGAGGTTTCACTGTTAGTCAAGCTTGGTCGCTTAGAAGAAGCCGATAAATTGTACCAGACACTGCTTTCCATGAATCCAGACAATTATAGATATTATGAAGGCCTTCAACAATGTGTAGGATTATATTCAGCAAATGGCCATTTTTCTCCTGATGAAATAGATCGGTTAGATACCTTGTACAAAACACTTGGGCAGCAATTTAAGTGGTCATCTGCTGTTAAGAGAATACCACTAGATTTTCTTCAAGGTGATAGGTTTCGAGAAGCAGCAGATAGTTATATTAGACCTCTTCTAACTAAGGGAGTTCCATCTCTATTCTCGGATCTTTCTTCATTATACAATCACCCTGGGAAGGCAGACATTTTGGAAAAACTTATTCTTGAGTTAGAGAATTCTATTAGGATGACTGGTCAGTACCCTGGGAGAGTGGAAAAAGAGCCACCGTCAACTTTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGTCAATATGAAATCGCACTTTCTAAAATTAATGAGGCTATAGAACATACACCTACCGTCATTGATCTATACTCTGCCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTGGCAGATGAAGCTAGGTGTATGGATCTCGGCGATCGTTATGTTAATAGTGATTGTGTGAAGCGCATGCTGCAGGCTGATCAGATGGTTTTGGCAGAAAAAACTGCCGTGCTATTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTACTTCCGCCAAGGGGATCTTGGACTGTCTCTCAAAAAATTCTTAGCAGTGGAGAAGCATTATGCAGATATTACCGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGTACATATGTGGAAATGCTTCAATTTCAAGACAGATTGCATTCACATGCATATTTTCGTAAAGCGGCTGCTGGAGCTATCAGATGTTATATAAAATTGCACGACTCTCCTCCAAAGTCAACTGATGAGGAGGATAGTGAAATGTCTAAGTTGCTTCCTGCTCAGAAAAAGAAACTGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCAAAAAAAGAGGCAGAAGAGAAAAATGAAGAATCAAGTGCTAGTGGGATATCAAAGTCTGGGAAACGTCATACAAAACCTGTAGATCCTGATCCTCGGGGTGAAAAGTTGTTGCAGGTTGAAGATCCATTGTTGGAAGCCACAAAATACTTGAAATTGCTGCAGAAGAATTCACCTGATTCTTTGGAGACACACTTGCTCTCCTTTGAATTATACATGAGAAAAAAGAAGATTTTGCTAGCCTTCCAGGCTGTAAAGCAATTGCTGAGGTTGGATGCAGAACACCCTGATTCTCATCGTTGCGTGATTAAATTCTTCCATAAAGTGGGATCAATGAATACTCCCGTGACTGATGGTGAGAAACTCGTTTGGAGTGTTTTAGAAGCTGAGCGCCAAACTATAAGTCAGCTGCATGGAAAATCTTTGCTTGAGGCAAATAATCTTTTCCTTGAAAAACATGAAGGTTCTTTGATGCATAGAGCTGCTGTTGGAGAAATGGTGTACATTTTAGATCCCAATAGAAGATCTGAGGCTGTCAAGTTGATTGAAGGGTCAACAAATAACCTTGTGTCAAGTAATGGCGCACTTGGACCAATCCCGGAATGGAGACTTAGAGACTGTATTGCAGTTCATAAACTTCTTGGATCAGTTCTTGAGGATCAGGATGCTGCATTGAGATGGAAAGTGCGCTGTGCCGAGTTTTTCCCATACTCTACATACTTTGAGGGTAGCCAAAGCTCTGCCACACCCAACTCTGCTCTCAATCAAATATGCAAGACCGCCGTAAATGGTACTTCTAGCCATTCACTGGGCGATCACGTTGTGGAACATGTCGCATCAAACGGCAAACTTGACACATTTAAAGATCTCACTATCTGA 2706 0.4095 MGATLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKYPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLAGFVETRQQLLTLKSNHRMNWIGFAVSHHLNSNASKAIEILEAYEGTLEDDYPPENERIEHGEMLLYKVSLLEECGFFERAFEELQKKESKIIDKLGYKEQEVSLLVKLGRLEEADKLYQTLLSMNPDNYRYYEGLQQCVGLYSANGHFSPDEIDRLDTLYKTLGQQFKWSSAVKRIPLDFLQGDRFREAADSYIRPLLTKGVPSLFSDLSSLYNHPGKADILEKLILELENSIRMTGQYPGRVEKEPPSTFMWTLFLLAQHYDRRGQYEIALSKINEAIEHTPTVIDLYSAKSRILKHAGDLAAAAALADEARCMDLGDRYVNSDCVKRMLQADQMVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLSLKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLQFQDRLHSHAYFRKAAAGAIRCYIKLHDSPPKSTDEEDSEMSKLLPAQKKKLRQKQRKAEARAKKEAEEKNEESSASGISKSGKRHTKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHLLSFELYMRKKKILLAFQAVKQLLRLDAEHPDSHRCVIKFFHKVGSMNTPVTDGEKLVWSVLEAERQTISQLHGKSLLEANNLFLEKHEGSLMHRAAVGEMVYILDPNRRSEAVKLIEGSTNNLVSSNGALGPIPEWRLRDCIAVHKLLGSVLEDQDAALRWKVRCAEFFPYSTYFEGSQSSATPNSALNQICKTAVNGTSSHSLGDHVVEHVASNGKLDTFKDLTI* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6884 901 MobiDBLite consensus disorder prediction 577 646 - -
Psa5g6884 901 MobiDBLite consensus disorder prediction 577 594 - -
Psa5g6884 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 186 696 IPR021183 -
Psa5g6884 901 Pfam TPR repeat 84 123 - -
Psa5g6884 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Psa5g6884 901 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Psa5g6884 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
Psa5g6884 901 MobiDBLite consensus disorder prediction 631 646 - -
Psa5g6884 901 Gene3D - 505 725 - -
Psa5g6884 901 Coils Coil 596 620 - -
Psa5g6884 901 MobiDBLite consensus disorder prediction 606 622 - -
Psa5g6884 901 Gene3D - 2 503 - -
Psa5g6884 901 PIRSF NAT_A 1 818 IPR021183 -
Psa5g6884 901 SUPERFAMILY TPR-like 17 440 IPR011990 GO:0005515
Psa5g6884 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Psa5g6884 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Psa5g6884 901 SMART tpr_5 43 76 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6884 Psa-Chr5 566413329 566425858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6884 K20792 - gmx:100776968 1546.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6884 5 566413329 566425858 Psa5g6884 5 566413329 566425858 ECH
Psa5g6884 5 566413329 566425858 Psa7g5803 7 483865406 483884329 PCT