Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5728 ATGCCGCTCTCGAAGTACCTTATACGGAACGAGTACAGCTTGGCGGATCCCGAGCTGTACCGCGCCACCGACAAAGATGATCCCGAAGCTCTTCTCGAAGCCGTCGCCATGGCTGGTCTCGTTGGACTATTGCGCCAGCTCGGCGACCTCGCTGAGTTTGCTGCTGAGATCTTCCATGATTTACATGAAGAAGTAATGGCTACCGCTGCAAGAGGCCACAGTCTTACAGCTCGTGTTAAACAGCTTGAGGCTGAAGTTCCTTCACTTGAAAAGGCCTTTTTCTCTCAAACTCACCATTCATCATTTTTTACTAATGGAGGGATTGATTGGCATCCCAATCTTCAGTCTGAACAAAACCTTGTTGCCGGTGGAAACCTACCTCGATTGATAATGGATTCCTATGAAGAATGCCGCGGTCCCCCAAGACTGTTCCTTCTGGATAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAGCGTTATACTGATCCATCATTCTTTAAAATGGAGTCAGCTTCATCTGTAAGAGCCACAGTACAAGTCCACAGGGAAAGAAGAATTCGTAAAGTGAAGAAGAAAGGAGCACGTCTAAGGGACGTTGAAGCTCCTAATGCTGTACCAACACATTCAAAATTACATCAGCTGCTTCTTGAGGAACGTATTGAGAATGGTTATAGTAATCCAGCTCGCCTAGTGAAGCTGAAGAAAAGACAATTGAATGGACCTGCTGTTGAAGCAAAATCTGGAAAAAGTTACATGGAGAAATTTCTAGAAACTCCCTCGCCTGATCCGAAAATGATTTATGAAACTTCAATCTTTCCGCTGCCCGTGAAACCGGCACCAGATGATTCTAGCGAAGCAGGGATTAAAATTCTTGAAATCAGTAGCATTAAAAAGTCGATTGGAGATGAAAACTCTTGTTCACCCCCTTATGAGCAGGAGTTTGAACTTAACCAATTTCCAGAAGAGGTTGGTGAGGCAAATGGAGATCTTGTGATGGTGAAAGAACAAATCTCAGTGGGTGTAAGGGATGAAATGTCTTTTAATGATGTCAAGGTGTCTGATGAAAGAGAATTGGCAATCAATGAACAAAAGAAAATAGAAGGCAGCTTAGTTAGGTACAATTCTGATGATGTGACCAGTGAGGTTGACAACTACATGGATGCTTTAACTACCATGGAGTCAGAATTGGAAACAGACGATGAGTATAAACCTAAGAAAAGCTTCTTGAATCTTAAAAAGGCAACAAATACCAATAATAAAGAACGTCAACTACAAGCTCGATTTTCAGATTCCCAATCATTTGGAGGCTCTTCAACATCTGATGACATTAGCTCATTCAAACAAGAGACAGCTGAGGAAGATATTGAAGTGAAAACTCGGTTATCAGATTCTCACTCAACTGGAACCTCCTCAACATCAGACAATAATAGCTCATTCAGAGGAGATGGAGACGAGCATGTGGAACTGCAAGCTCACTTTTCAGATTCTCAATCCACTGGAAACTCCTTTACGTCAGATGTAAATAGTTCTTCCATGAAAGAGATTGAAGGCATGCCATCCAACCAGCTTCCCGAAATTGTTGAGTTTCAAAATGCAGATAATAGAAAGCCTGTCATGCGTGATGATGCCCATGTTCATGAAGAAGGGGTTTCTGACTCTCGGCAAACAAATTCTGAGCCGATGACTTCAGAAAAGATGTTGTGTTCTTATCTTGAGCCTACCAAACCAGTGATGCTACCTGCAGTGACTCAGTCAGATGATAGCGTTTCTGACAATATTGAGCTTAATACAAGATTAGGCAATGGTGCAGACAGATCAGATCTTGTTGAACCTGTTGCTTCCAAACCTTCTTCTCCCTCCCTTATAGAAGATGATACGTGCCCCGTGTACTCTTCTGACAAAATTTCATCAGACAACTTGGTTGATGATTCCCTTTGTAATGATTCACAAGAAGGTTCCCTTTGTCCATCCATCAAAGAATTAGACTTGAATTCAGGTCTTAATGTGGTGCTTGACCGCCTAGACTCAAAAGATGAGGATTGTATTGATATTGCATGCCAACTTAATCCAACTGTTGTGAAGGTTCCTCCAGTGAGTTTCCTTAATGGCGAGCTATCTTCTGGTATATCTCACAATAATCCACAGGATGGACTGGGCTCAACAGAAGTTGAAGTTCCGTTTTCTGATCTTCAATCAAATGATGTAAACATACCTAAAATGGTGCATGGCAATGAAATAAATGGATTCAGCAGCAGTGTTGATCCTGTTGAAGGTGATGGTCAAATAGAAAATCCATCTTATAATCATGTGATGGTAAATAGTGCGATCACTGAAATTGTTGAGTCAAAAGCTCAACCCGTTCCTTCTGTTGATAATGCTCAAAATGATGTGGGTATCATTACTTGTCCAGCTTCAAGTATGATTTGTTCTCCATCAAGAAGCCTTTCGAATTCGCAAGAACTAGTCCACGCTTCTTCAGACTCTTATCCGATGGAATCCAATGAAGTGGGATTGACTCAAATTTCCATGGACTCAAATACAGAGACGAGCAAGAGTCAATTGGCACCATTGTCAGATACAACGTCTAATATCATGTTTTCTCCAATGAGTAATCTCATAAAAATAGAAGAATCTGTTTCTGCTTTTTCAGATCCAAATGAGAAAGAGACAGAAGACCATGAGGCAGTTGCTAGAGAATCTTTGACAGCACTAGAAGGACAGATGGTAGCGGGTCATCCAGAACTTGTTTCTTCAGATGTACAAATGAACCTTAACAAATTGGTGCATTGTGATCCTCAAGATTTGGAAAATAATATTGAAAAGTCACCTCCTAGGAAGAAAATCATACAGAGTGTTTTCCAGGATGATGCGAAAATGGTGCCTGGATTTTCTGGGTTTGACACCCAGCAGTCAGAATCTACTAGTTATGGCCAGAATGACAGAAATGGTTTTTCATCTATACCTGATAACAAGTTGGAGTCTGAAACTTATTTAGAGCCACACTTACAATCTCAACTTGATGAACAGAATGGAGAGTTCTCGCTCAAATATGAGGAAAACTTTTCCTTTGAGAAATCTCAATCTCAGCAGATGCATATAAATCAATTGAAACAAGAAGACACTCATGCTACATCTGAATCTGTCTCAGAAGCCCCTGCAGATGAATCACCATCATTTTATTCTTCACCACAGTCATCTGGCATGGAAATTAACCCTACACAATATGTCACAGATCCATTGAAGCCTCTTCTCCCTGATCTCTTTCCTAAGGAAACTGAAAACAAACTTGATGAGATGCCACCTATGCCTCCTCTACCTCCCATGCAATGGAGAATGGGCAAAGTTCCACATGCTTCCCTAGATTCACACAGAGAGGAGTTAGAAGTTCATCCGGCTTCAGTTCAACCAATGCAGCCAGTTATGCCAGATACAAAGTCTCAATTTGGTTTTACAGATTCTGATGGAGATACCCTATTTCATCAGAATCCATTTTTGCCAATCATGGCTTTGGAAAGTGATAAGCCCCAACATTCTTCTGCCGTAGGTGTTTCAGGTCATCCAGTTGCTTTACCTTTTCAGTTTCCTATTGTGGTTAATGAAACAAATGGTCAGTATAATTACCTAGTGCTGGACAGGAACCAGATTCAGAACCCCTTATTAACGCTACCCATGGTACCTACGAGCATGCATCCACCACTTGGTTACTTTGTTGCTTCTGATGGAGAAATAGTACAGCCTTCAAACCCTTACGCACCAGTACTACCGGCTACTGCATCTGGATGTGATTCCACATCTCCCCAAGTGGAACCATTTCAACATCCAACTCAAGTAATGACAGAGACTAGTGCAGATGATAAAACACTTGAGCAGCCTATGCATAATGTAGTGTGTAGAGACGGGCCTCCAAACAGTCATGTTATTGCTTCTGATGGAGAATTGGTACATAATTCAAACCCATTCCTTCCAATACCACCCGTCGAATGTGCTAACTCAGGACATGATTCCATCTCTCCTATAGAAAACGTTGGTGAATCTCCTAGTCAATTAATGACTGAGACAAGTTCAGATGATACGACATTTCCGCAGCCTATGAGTAATGTTATATCTATGGACAGTCACATTGTCATTTCTGAAGAAGAAACGGTACCAAATTTTAACCCAGGCCCTCCTGTACTATCAGCTGAATCTGCTGTTTCTGAACACGGTTCCATCTCTCCGCAAGAAAAACTAACTCAACCTCCAAGTCATTTACTGAGGGAGACTAATTTGGAAGTAAAAACACCTAATCATTCTGTAAGTAATGTAGAAGGGGAACAGGGACGATTGGGTATTTCACTCATGTTGCCACCAAACATGGAAAGAAATCAGAGTTTCCAGCCCTTTGAGGGGGAAATGTCTTCCTTGGGTCCATCTGCTCAAACATCAGATTTTGAGAGTGAAAGAACAAATGTAAAACCAAGGCATAAGATTCCTCGTCCTCGAAATCCTCTAATTGATGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGAAGGGCTACTGAACGGGTTATGCCTCAAATTGCACCAAAGGTAGATGAAAGAGATTCTTGGTTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAACCTGCTGTTGCTAAACGACCTAGCATTCAAGGTCCAAAAACAAATATGAAGCTTGCTGCCATCTTGGAGAAAGCTAATTCAATTCGCCAGGCTTTGGCTGGAAGTGATGAAGATGATGATGCGGATAGTTGGAGTGATTCTTGA 4773 0.4167 MPLSKYLIRNEYSLADPELYRATDKDDPEALLEAVAMAGLVGLLRQLGDLAEFAAEIFHDLHEEVMATAARGHSLTARVKQLEAEVPSLEKAFFSQTHHSSFFTNGGIDWHPNLQSEQNLVAGGNLPRLIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESASSVRATVQVHRERRIRKVKKKGARLRDVEAPNAVPTHSKLHQLLLEERIENGYSNPARLVKLKKRQLNGPAVEAKSGKSYMEKFLETPSPDPKMIYETSIFPLPVKPAPDDSSEAGIKILEISSIKKSIGDENSCSPPYEQEFELNQFPEEVGEANGDLVMVKEQISVGVRDEMSFNDVKVSDERELAINEQKKIEGSLVRYNSDDVTSEVDNYMDALTTMESELETDDEYKPKKSFLNLKKATNTNNKERQLQARFSDSQSFGGSSTSDDISSFKQETAEEDIEVKTRLSDSHSTGTSSTSDNNSSFRGDGDEHVELQAHFSDSQSTGNSFTSDVNSSSMKEIEGMPSNQLPEIVEFQNADNRKPVMRDDAHVHEEGVSDSRQTNSEPMTSEKMLCSYLEPTKPVMLPAVTQSDDSVSDNIELNTRLGNGADRSDLVEPVASKPSSPSLIEDDTCPVYSSDKISSDNLVDDSLCNDSQEGSLCPSIKELDLNSGLNVVLDRLDSKDEDCIDIACQLNPTVVKVPPVSFLNGELSSGISHNNPQDGLGSTEVEVPFSDLQSNDVNIPKMVHGNEINGFSSSVDPVEGDGQIENPSYNHVMVNSAITEIVESKAQPVPSVDNAQNDVGIITCPASSMICSPSRSLSNSQELVHASSDSYPMESNEVGLTQISMDSNTETSKSQLAPLSDTTSNIMFSPMSNLIKIEESVSAFSDPNEKETEDHEAVARESLTALEGQMVAGHPELVSSDVQMNLNKLVHCDPQDLENNIEKSPPRKKIIQSVFQDDAKMVPGFSGFDTQQSESTSYGQNDRNGFSSIPDNKLESETYLEPHLQSQLDEQNGEFSLKYEENFSFEKSQSQQMHINQLKQEDTHATSESVSEAPADESPSFYSSPQSSGMEINPTQYVTDPLKPLLPDLFPKETENKLDEMPPMPPLPPMQWRMGKVPHASLDSHREELEVHPASVQPMQPVMPDTKSQFGFTDSDGDTLFHQNPFLPIMALESDKPQHSSAVGVSGHPVALPFQFPIVVNETNGQYNYLVLDRNQIQNPLLTLPMVPTSMHPPLGYFVASDGEIVQPSNPYAPVLPATASGCDSTSPQVEPFQHPTQVMTETSADDKTLEQPMHNVVCRDGPPNSHVIASDGELVHNSNPFLPIPPVECANSGHDSISPIENVGESPSQLMTETSSDDTTFPQPMSNVISMDSHIVISEEETVPNFNPGPPVLSAESAVSEHGSISPQEKLTQPPSHLLRETNLEVKTPNHSVSNVEGEQGRLGISLMLPPNMERNQSFQPFEGEMSSLGPSAQTSDFESERTNVKPRHKIPRPRNPLIDAVAAHDKSKLRRATERVMPQIAPKVDERDSWLEQIRTKSFNLKPAVAKRPSIQGPKTNMKLAAILEKANSIRQALAGSDEDDDADSWSDS* 1591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5728 1590 MobiDBLite consensus disorder prediction 414 446 - -
Psa7g5728 1590 PANTHER WASP-1 1 638 IPR028288 GO:0005856|GO:0030036
Psa7g5728 1590 PANTHER WASP-1 650 1363 IPR028288 GO:0005856|GO:0030036
Psa7g5728 1590 PANTHER WASP-1 1299 1590 IPR028288 GO:0005856|GO:0030036
Psa7g5728 1590 MobiDBLite consensus disorder prediction 493 518 - -
Psa7g5728 1590 MobiDBLite consensus disorder prediction 1025 1069 - -
Psa7g5728 1590 Gene3D - 1 90 - -
Psa7g5728 1590 Gene3D - 1498 1589 - -
Psa7g5728 1590 Gene3D - 104 214 - -
Psa7g5728 1590 MobiDBLite consensus disorder prediction 414 523 - -
Psa7g5728 1590 MobiDBLite consensus disorder prediction 447 462 - -
Psa7g5728 1590 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1299 1590 - -
Psa7g5728 1590 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 638 - -
Psa7g5728 1590 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 650 1363 - -
Psa7g5728 1590 MobiDBLite consensus disorder prediction 601 621 - -
Psa7g5728 1590 MobiDBLite consensus disorder prediction 463 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5728 Psa-Chr7 481580657 481588749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5728 - - cam:101510085 2192.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5728 7 481580657 481588749 Psa7g5728 7 481580657 481588749 ECH
Psa3g2827 3 238063729 238071993 Psa7g5728 7 481580657 481588749 PCT