Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2827 ATGCCTATCTCCAGGTACCACATTCGTAGCGCGCACAGTTTGGCGGATCCGGAGCTGCACCATGCCGCCGATAAGGATGACTCCGAAGCTCTCCTTGAAGCCGTAGCCATGAGTGGACTCGTCGGCTTCTTGCGCCAGCTTGGCGACCTCGCTCAATTTGCTGCTGAGCTGTTCCACGACTTGCATGAAGAAGTAATGGCTACGGCTGAAAGAGGCCACAGTCTTATCTCTCGTGTTCAACAGATTGAGGCTGAAATTCCTCCACTTGAGAAAGCATTTTTGTCACGAACTCATCATCCGTCTTTCTTCACAAATGGAGGGATTGACTGGTGTCCTAATCTTCGATCTGAACAGAATCTTGTTTCGCGCGGAGATTTACCTAGATTTATAATGGATTCATATGAAGAATGCCGTGGTCCACCTAGACTTTTCCTTCTAGACAAGTTTGATGTCGCTGGTGCTGGAGCATGTCTGAAGCGTTATTCTGATCCATCATTCTTTAAAGCAGAGCCTGCTTCATCTGTAAGTGTAACAGAAACAGTAGAAGCTCACAGGGAAAGGAAAATTCGTAAAGTCAAGCAAAAGAAAGGGGAATGGCGGAGGGATGGTGAGACCCCTGGAGCTGTACTATCACATTCAAAACTACATCAGTTGTTTCTTGAGGAGCGTATTGAGAATGCGTGTAGTGATCCTGCTCGTCTTGTGAAACTGAAAAAAAGACAATTCGATGGATCTGCAGTTGAAGCAAAATCTGGGAGAAGCTACATGGAGGAAATTCTGGAAATGACCTCACCTGATCATCAAATGGCTTGTGAAACTTCAATCAATCCACTGCCTGTGAAATTGATGTCAAACGACACTAGTGAAACTGGGATTGAAATACTCGAAATCAATGGCATTTCACATATGAGAAGGTCTATTGAAAATGGAAAAACACATTCATCAAATGAGCAGGAATTTGAACTTAATTCATGCTCAGAAGTAGGCAGGAAAACAAATGGATATCTTGTGAAGGAGCCCGGACAAATCTCTTCTGGTGGGACAGGTGAAGTGTCTTCTAAGCATCTCAAGGTACCTGATGAAACAGAACTAGTGCATGATGATGGACAAAACAAATCTCTTCTGGTTAAGACAAATGGATATCCTGTGAAGGAGCCCGAACAAATCTCTTCTGGTGGGATAGGTGAAGTGTCTTCTAAGCATCTCAAGGTACCTGATGAAACAGAACTAGTGGATGATGATGGACAAAACAAATCTCTTCTAGTGAAGACAAATGGATATCTTGTGAAGGAGCCTGAACAAATCTCTTCTGGTGGGATAGGTGAAGTGTCTTCTAAGTATCTCAAGGTACCTGATGAAACAGAACTGGTGGATGATGATGGACAAAACAAATCTCTTCTAGTGAAGACAAATGGATATCTTGTGAAGGAGCCCGAACAAATCTCTTCTGGTGGGATAGGTGAAGTGTCTTCTAAGTATCTCAAGGTACCTGATGAAACAGAACTAGTGGATGATGATGGACAAAACAAATCTCTTCTAGTGAAGACAAATGGATATCTTGTGAAGGAGCCCGAACAAATCTCTTCTGGTGGGATAGGTGAAGTGTCTTCTAAGTATCTCAAGGTACCTGATGAAACAGAGCTAGTGGATGATGATGGACAAAACAAAAGAGAAGGCAGCCTAGACTGCTATCATTCTGATGACGCGGCTAGTGAGGTTGATGATTATATGGATGCATTAGCTACCATAGACTCCGAGTTGGAAATAGACAATGAGTGTGGACCTAAGAAAAGCTCCTTGAATGTTCAAAAGCTAATTGATTCAAATGGTGAAGAAGAACATCAGCTGCAAGCTCCGTTTTCAGATTCTCAATCATTTGGAGACTCATCATTGTCTGAGGAAATGAGTTCATATGAACAAGATAGAAGTAAAGAGAATAATGAAGTGCAAGCTCAGCTGCCAGACTCTCGGTCAGCAGGAACGCCTTGTGCATCAGATGATGATAATAGTTCATTCAGAAGAGATAGAACTGAAGAACATACCCAACTGCATGCTCAGTTATCAGATTTTCAATCTATTGGAAATTCCTCACTAGAAACTGAAAATATGCTTTCCAACCAGCTTCCACAAACTGGTGAATTGAAAAAAATTTATGATGAGTTTGTCACACGTGATGATGCACATGATCTTGAGGGAGAAATATCTGATTCTGAACCAGTCTCTTCTGGTTCATGTCCGGTGGATTCAGGGTGTTTATTATTGTCTTCGGATCATGGAGCTACAGCTCTATCAGATAAAACACCACATGTTCCTGTTGAAAGACATTTAAGACTAGAAGATGATGAAGACACCATCTCCCTAATAAAAGATAATAATCTCCCAGTTGTCTATTTTGACAACATTTCTTTGAACAACTTGGATGTCTGCAATCCTCATGTCCATTCCCATACTACGTTACAAGTTTCCAATGATTTAAATTTAGCCCATGAAGGCGAATGTGGTGATCATTCTGACATCAAAGTAATGCAGGAAGAATCTCATAATGAGCACTGTTCTGAAATATCAACTTTTGGAGACATTGGTTCACGAGGGGAGAATTCCATTTGTCTGCCCATGGAATTAGACCTTAATTTGGGCACTAAAATGCAGCCTGATGACTGGGACTTACAATCCGATGATGATATTAAAGCAATGCAACTTGACTCGGAAGATTTGTTTCCTGTTGTGGAGACTACCGTAGAGAATAGCTTTGCAGAGGAGCTATTCTCTGATTTTATACACGGAAATCCACAACATGAACCAGATTCGGTAGAAGTTAAAATTCTTTATCCTGATCAGCTATCAAATGTTGAAGAGGTACCAAAGATAATGTTTGGCAGTGAAAGAAATGAATCTACCTGCAGTTTGGATCAAGTTGAAGAAGATGATCTTATTAAACATCCACCTTCCCCTAATTACATACCGCAGGATGATGATATCGTGGTAAATGATATGTTCCCTGTAAAAGATTTGGCTGTATCTGCTATCTCTTCTCTTGATAATGCTGAAATTGATGCAAGTGTCGTTAATTGTCAAGCTTCAAGTTCTATTTCTTCCCCATCAATAAATCCTTCAAATTTGCTTGAATCTTTCCCAGCTTCTCCATATTCCAATAGGATGGAAATGGAATCCAATGAGATAGAGTTAACAAAAATTTCCTTAGACTTGAATGCAGAGAAAAGAGAAAATCAACTGGAACCATTTTCAGATATGACATCTCCAGTGAATATGACATCTCCAGTGAGTAGTCTTACAAATTTGGAAGAATCTCCTTCTACTTTTGATGATTCTCACTGGAAAAATTTGGAAGTCAGTGAGGAAGTTGCAAGAGATTCTTTGACAGAGTTTACGTCACATTTAGTAGTGGATCAACTGAAAATTGCTTCTACTGATGAACTGTTGAGCCTGAACAGATCAGACTCTTCTAACTCTAGTATATGTAATAATTTCCAATGTTCATTGCATAAGGAGAAAGACCAAGATAGTTCTTCTCTCAATGACATGAAAATGGTGACACAATGTTCGGAGCTAGACTCTCAGGATTCAGAATCTACAATTGTTTGCAAGAATGATCTACAGAACAGTAAAGGTAGTTTTTCACCACCTTCCTATAATCAATTGGAGCCTGAAACCCATTTAGAGTGGACCTTAAAACCACGAGTTGTGCAGCATGATGTGGGTTTTCTGCTAAAAAATGAAGAAAAATGCACCTCTTCAAAATTTGAACCTCATCCGATGCAGATATCAAATCAGTTGGAGGGAGAGAGAATAAATTGTGTTGCTTCTGAGTTTTCTGCTGAAGTCCATCTAGAGGAATCTTCAGATGGTTCCGCATCAAAGTCATCTGATCAGAAGATTAGCCCATCAAAACATTTCACGGATCCATTGAAACCTCTCCTTCCTAATCTTTCTCCCAAGGCAACCAAAATAAACCTCGAGGAAACGCCGCCTATGCCCCCTCTACCACCTATGCAGTGGATAACGAGCAGGGTTCAAAATGCTTCCCTAGTTTCAGAGAGAGAAGAATTAGGTTGGATAACGAGCAGGGTTCAAAATGCTTCCCTAGTTTCAGAGAGAGAAGAATTAGGTAATCCTTTTTTGCCTGCTGTGGCTGTGGAGAGTAATAAAAGCCTACGCTCTTCTGGGTTATCAGCAGGTATTTCAGAGCATCCTGTTGCTATTCCTTTGCAGCTTCCTGTGATGGTAAATGATGCAAATGGTCAGCATAATTACCAAGTTCTGGAGAGAAGTCAAATTCACAACCCTTTCTTAGCATTGCCAATGCTATCTTATGGTTGGCTGCCACATGGACGTGTCGAAGCTTCAGAGGGAGAAAGCATTTTGAAATCAAATCCATGCCCACCAATACATCTCACTGAATGTGCTGTTCCTGGGGCTGATACCAGCAACCAACAAGAAAAATTGTCTCAGTTCAAGAGTCAGTTAGTGGAAGATACTAGTATAGAAGCTAAAAAGGATAGTCCTGGAGAATGTGTATTGAATTCAAGTTCATGGCCACCAATACTGCCTACTGAATGTGCTGTTCCTGGGGCTGATACCATCTTTCAACAAGACAAACAGACCCAGTCTTCTGGTCAAATTATGGAAGATACATGTTTTGAGGCTAAAAAAGACAGTCCGGGAGAATTGCACTCAGTGCTACCTGCTGAATGTCCTGTATCTGGAGATGATCCCCTTTCTTCAAACGAACAACATTCTGATTCTCCAAATGCATTAATGGAGGAGACTGTTCTGGAATTTACAACCGATGAGGAACCATCAATTCATTTGGAAAGGGAACAAGGTGATCATATATTCTCACCTAAGCCACCACCACCAAGTATAGAAATTGTGCAGCCCAATCACAGCCTGCTGCCCTCAGAGGGGGATGTGGCACTGTCTTTGGATACATCCGCCCAATCATCAGAATTTGATGATCAAATACCAAATGGAAAATCAAAGAAGCTTCCTCCACCTCAGAACCATTTATTTGATGTTGTTGCTGCTCTTGACAAAAGCAGGCTGAGAAAGGTTACTGATCGTGTTAGGCCCCCAATAGCACCAAAGGTAGATGAAAGAGACTCATTGTTAGAACAGATTAGAACAAAGTCCTTCAACTTGAGGCCTGCTGTGGTTACGCGACCCAACATTCAGGGTCCCAAAACGAACTTGAGGGTTGCTGCCATCTTGGAGAAAGCAAATTCTATTCGCCAGGCTTTGGCTGGAAGTGATGAAGACGATGATGCTTGGAGTGATTGTTGA 5301 0.4133 MPISRYHIRSAHSLADPELHHAADKDDSEALLEAVAMSGLVGFLRQLGDLAQFAAELFHDLHEEVMATAERGHSLISRVQQIEAEIPPLEKAFLSRTHHPSFFTNGGIDWCPNLRSEQNLVSRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYSDPSFFKAEPASSVSVTETVEAHRERKIRKVKQKKGEWRRDGETPGAVLSHSKLHQLFLEERIENACSDPARLVKLKKRQFDGSAVEAKSGRSYMEEILEMTSPDHQMACETSINPLPVKLMSNDTSETGIEILEINGISHMRRSIENGKTHSSNEQEFELNSCSEVGRKTNGYLVKEPGQISSGGTGEVSSKHLKVPDETELVHDDGQNKSLLVKTNGYPVKEPEQISSGGIGEVSSKHLKVPDETELVDDDGQNKSLLVKTNGYLVKEPEQISSGGIGEVSSKYLKVPDETELVDDDGQNKSLLVKTNGYLVKEPEQISSGGIGEVSSKYLKVPDETELVDDDGQNKSLLVKTNGYLVKEPEQISSGGIGEVSSKYLKVPDETELVDDDGQNKREGSLDCYHSDDAASEVDDYMDALATIDSELEIDNECGPKKSSLNVQKLIDSNGEEEHQLQAPFSDSQSFGDSSLSEEMSSYEQDRSKENNEVQAQLPDSRSAGTPCASDDDNSSFRRDRTEEHTQLHAQLSDFQSIGNSSLETENMLSNQLPQTGELKKIYDEFVTRDDAHDLEGEISDSEPVSSGSCPVDSGCLLLSSDHGATALSDKTPHVPVERHLRLEDDEDTISLIKDNNLPVVYFDNISLNNLDVCNPHVHSHTTLQVSNDLNLAHEGECGDHSDIKVMQEESHNEHCSEISTFGDIGSRGENSICLPMELDLNLGTKMQPDDWDLQSDDDIKAMQLDSEDLFPVVETTVENSFAEELFSDFIHGNPQHEPDSVEVKILYPDQLSNVEEVPKIMFGSERNESTCSLDQVEEDDLIKHPPSPNYIPQDDDIVVNDMFPVKDLAVSAISSLDNAEIDASVVNCQASSSISSPSINPSNLLESFPASPYSNRMEMESNEIELTKISLDLNAEKRENQLEPFSDMTSPVNMTSPVSSLTNLEESPSTFDDSHWKNLEVSEEVARDSLTEFTSHLVVDQLKIASTDELLSLNRSDSSNSSICNNFQCSLHKEKDQDSSSLNDMKMVTQCSELDSQDSESTIVCKNDLQNSKGSFSPPSYNQLEPETHLEWTLKPRVVQHDVGFLLKNEEKCTSSKFEPHPMQISNQLEGERINCVASEFSAEVHLEESSDGSASKSSDQKISPSKHFTDPLKPLLPNLSPKATKINLEETPPMPPLPPMQWITSRVQNASLVSEREELGWITSRVQNASLVSEREELGNPFLPAVAVESNKSLRSSGLSAGISEHPVAIPLQLPVMVNDANGQHNYQVLERSQIHNPFLALPMLSYGWLPHGRVEASEGESILKSNPCPPIHLTECAVPGADTSNQQEKLSQFKSQLVEDTSIEAKKDSPGECVLNSSSWPPILPTECAVPGADTIFQQDKQTQSSGQIMEDTCFEAKKDSPGELHSVLPAECPVSGDDPLSSNEQHSDSPNALMEETVLEFTTDEEPSIHLEREQGDHIFSPKPPPPSIEIVQPNHSLLPSEGDVALSLDTSAQSSEFDDQIPNGKSKKLPPPQNHLFDVVAALDKSRLRKVTDRVRPPIAPKVDERDSLLEQIRTKSFNLRPAVVTRPNIQGPKTNLRVAAILEKANSIRQALAGSDEDDDAWSDC* 1767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2827 1766 PANTHER WASP-1 515 1078 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 1059 1511 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 377 418 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 1 372 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 469 510 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 1509 1765 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 PANTHER WASP-1 423 464 IPR028288 GO:0005856|GO:0030036
Psa3g2827 1766 MobiDBLite consensus disorder prediction 611 690 - -
Psa3g2827 1766 Gene3D - 1 90 - -
Psa3g2827 1766 MobiDBLite consensus disorder prediction 614 634 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 372 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 469 510 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 423 464 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 377 418 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 515 1078 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1059 1511 - -
Psa3g2827 1766 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1509 1765 - -
Psa3g2827 1766 Gene3D - 104 206 - -
Psa3g2827 1766 ProSiteProfiles WH2 domain profile. 1705 1723 IPR003124 GO:0003779
Psa3g2827 1766 MobiDBLite consensus disorder prediction 649 667 - -
Psa3g2827 1766 MobiDBLite consensus disorder prediction 1283 1313 - -
Psa3g2827 1766 MobiDBLite consensus disorder prediction 668 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2827 Psa-Chr3 238063729 238071993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2827 - - cam:101512913 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2827 3 238063729 238071993 Psa3g2827 3 238063729 238071993 ECH
Psa3g2827 3 238063729 238071993 Psa7g5728 7 481580657 481588749 PCT