Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5051 ATGGAGACAGAAGCTGAAACTGTGCAGCCTCAGGTTGCACCGGTGAGGTCCAGTAGGAAGAAAATGACGAAACAATTGACTGGGAAGCGTGATGATACGCCTTTACATTCTGCGGCTAGAGCGGGAGATATGGCTTCTTTGAAGGGCACGGTGGATGGTGCTGAAGAGGGTAAACTGCGTGAAGTGTTTGCGAAGCAGAATCAAGGTGGAGAAACGGCACTTTATGTTGCTGCTGAGTATGGTTATGTCGATATGGTTAGGGAGATGATTCAGTATTATGATCTTGCTGATGCTGGAATTAAAGCGAGAAATGGTTTTGATGCACTTCATATTGCTGCTAAACAAGGGGATTTAGATATAGTGAAGATCCTAATGGAGGCTCATTCTGAACTAGCAATGACTGTGGATCCATCCAACACTACAGCCTTACACACAGCTGCAACACAAGGGCACACTGAGATAGTGAAATTTCTATTAGAAACAGGTAGTAGCTTGGCAGCCATAGCTAGAAGTAATGGCAAAACAGCTTTACATTCTGCTGCAAGAAACGGACATTTGGAGGTAATGAAAGCGATTCTCGAGAAGGAGCCTGGTGTTGTAACAAGAACTGATAAAAAAGGACAGACGGCACTTCATATGGCGGTGAAGGGACAAAGTCTTGTGGTGGTAGAGGAGCTGATAAAAGCAGATCCATCAACAATAAACATGGTCGATAATAAGGGCAATACGGCATTGCATATAGCTACCAGGAAAGGTAGAACTCAGATTATTAAGTTGATACTTGGGCAGAGTGAAACAGATGGCATGGCAATAAACAAAAGTGGCGAAACAGCATTAGACACAGCTGAGAAAACAGGAAACTCCGAAGTAAAAAGCATTCTAACAGAACACGGTGTTCAAAGTGGAAAATCCATAACAAAACCAAAAACAGCTGCAACCAGAGAATTAAAACAAACCGTTAGTGACATAAAGCATGAAGTCCATCACCAACTAGAACACACTCGCCAAACGCGAAAAAGCGTTCAAGGAATCGCAAAACGTCTCAACAAAATGCACACAGAAGGGCTCAACAACGCAATAAACTCAACAACCGTCGTCGCAGTCCTCATAGCAACAGTTGCATTCGCCGCTATCTTCACCGTCCCAGGCCAATTCGTCGATAATCCGAAAAAAGTTCCTAAAGGAAAGTCGCTCGGCGAAGCAAACATAGCGCCGCAGGCTGCGTTTCTAATCTTCTTTGTGTTCGACTCGTTTGCGCTTTTCATTTCTTTAGCGGTTGTGGTGGTTCAAACATCAATAGTTGTTATAGAAAGCAAAGCAAAGAAGCAAATGATGGCTATTATTAACAAACTAATGTGGTTGGCTTGTGTGCTTATTTCTGTTTCATTTTTGGCACTGTCTTTTGTAGTTGTTGGGAAAGATCACAGGTGGCTTGCAATTGGAGTAACTATAATTGGAACAACTATTATGGCTACTACATTGGGAACCATGTGTTATTGGGTTATTAGGCATCGAATTGAAGCTTCAAATATGAGGAGTATACGTAAATCTTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTTTCAGTTGTTATGTCAGATTCTGAGATATTAAACAATGAGCGTACTAAAATGTATGCTATTTAG 1647 0.4214 METEAETVQPQVAPVRSSRKKMTKQLTGKRDDTPLHSAARAGDMASLKGTVDGAEEGKLREVFAKQNQGGETALYVAAEYGYVDMVREMIQYYDLADAGIKARNGFDALHIAAKQGDLDIVKILMEAHSELAMTVDPSNTTALHTAATQGHTEIVKFLLETGSSLAAIARSNGKTALHSAARNGHLEVMKAILEKEPGVVTRTDKKGQTALHMAVKGQSLVVVEELIKADPSTINMVDNKGNTALHIATRKGRTQIIKLILGQSETDGMAINKSGETALDTAEKTGNSEVKSILTEHGVQSGKSITKPKTAATRELKQTVSDIKHEVHHQLEHTRQTRKSVQGIAKRLNKMHTEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDNPKKVPKGKSLGEANIAPQAAFLIFFVFDSFALFISLAVVVVQTSIVVIESKAKKQMMAIINKLMWLACVLISVSFLALSFVVVGKDHRWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNMRSIRKSSMGSRSRSFSVSVVMSDSEILNNERTKMYAI* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5051 548 ProSiteProfiles Ankyrin repeat profile. 240 261 IPR002110 GO:0005515
Psa7g5051 548 Gene3D - 168 350 IPR036770 -
Psa7g5051 548 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 9 548 - -
Psa7g5051 548 MobiDBLite consensus disorder prediction 1 47 - -
Psa7g5051 548 ProSiteProfiles Ankyrin repeat region circular profile. 240 261 - -
Psa7g5051 548 PANTHER ANKYRIN REPEAT PLANT PROTEIN 9 548 - -
Psa7g5051 548 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Psa7g5051 548 SUPERFAMILY Ankyrin repeat 34 299 IPR036770 -
Psa7g5051 548 Pfam Domain of unknown function 354 470 IPR026961 -
Psa7g5051 548 Pfam Ankyrin repeats (3 copies) 172 231 IPR002110 GO:0005515
Psa7g5051 548 Pfam Ankyrin repeats (3 copies) 99 165 IPR002110 GO:0005515
Psa7g5051 548 ProSiteProfiles Ankyrin repeat region circular profile. 104 131 - -
Psa7g5051 548 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Psa7g5051 548 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g5051 548 ProSiteProfiles Ankyrin repeat region circular profile. 138 165 - -
Psa7g5051 548 SMART ANK_2a 104 133 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 206 236 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 274 307 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 138 167 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 240 273 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 69 98 IPR002110 GO:0005515
Psa7g5051 548 SMART ANK_2a 172 202 IPR002110 GO:0005515
Psa7g5051 548 ProSiteProfiles Ankyrin repeat region circular profile. 172 195 - -
Psa7g5051 548 Gene3D - 5 167 IPR036770 -
Psa7g5051 548 ProSiteProfiles Ankyrin repeat profile. 138 170 IPR002110 GO:0005515
Psa7g5051 548 Pfam Ankyrin repeat 241 262 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5051 Psa-Chr7 443660572 443664127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5051 1 548 Miscellaneous Gene Families AT1G07710 70.620 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5051 - - gmx:100808971 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5051 7 443660572 443664127 Psa7g5051 7 443660572 443664127 ECH
Psa5g6483 5 548018846 548021287 Psa7g5051 7 443660572 443664127 ECH