Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4571 ATGAGTACTACTTCCACTCACATCCACAAAGATATTGATCAACCATTGCTAGCATCCAATGAACCAACAGCGGAAGAACTACCATCGTCCTTCACTCATTCGTTTGGTTCAAAACATGAATCAGATGGTGAACTTGAAAGAATTCTATCAGACACAAGTCTTCCTTTTCTTAAACGTCTTGGACTTGCTTCATGGGTTGAGTTTAAGATGCTTTTTTACCTTGCTGCCCCTGCTGTTGTTGTGTACCTTATAAACTATGTCATGTCAATGTCCACTCAAATATTTTCTGGGCATCTTGGTAATTTGGAGCTTGCTGCTGCTTCACTTGGAAATACTGGGATACAAATCTTTGCTTATGGTCTCATGTTAGGCATGGGGAGTGCAGTTGAGACACTATGCGGACAAGCATTTGGTGCAAAAAAGTATGACATGTTAGGCATATATTTGCAAAGATCCACAGTTCTTCTCACAATAGCAGGTTTAATATTGACATTAATATACATATTCTCCAAACCACTTCTGATATTTCTAGGTGAATCACCAGAAATTGCATCAGCAGCATCACTTTTTGTCTATGGTCTAATTCCGCAAATATTTGCCTATGCTGTGAACTTTCCAATACAAAAATTTCTCCAAGCACAAAGCATAGTTGCACCAAGTGCATACATATCAGCAGGAACATTGGTTATTCACGTTATATTAAGTTATGTTGCTGTGTACAAATTTGGGCTTGGTTTATTGGGTGCTTCATTGGTTTTGAGTTTCTCTTGGTGGATAATTGTGATAGCACAGTTTGTATATATTGTGAAGAGTGAAAAGTGTAAACATACATGGAAAGGGTTTAGTTTTCAAGCCTTTTCAGGGTTGCCAGAGTTTTTCAAATTATCAGCTTCATCAGCAGTGATGTTGTGTTTGGAGACTTGGTATTTTCAAATATTGGTTTTGCTTGCTGGGTTGCTTCCTAATCCTGAATTGGCTCTTGATTCTCTCTCTATTTGTGCCACAGTGTCTGGATGGACGTTCATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAATTAGGAGCAGGAAATCCAAAATCAGCCTCATTTTCTGTTTTGGTGGTGACCGTGATTTCTTTCATAATATGTGTTATTTTAGCACTTGTGGTTCTTGCATTAAGGGATGTTATTAGCTATGTCTTCACAGACGGTGAAGTAGTCGCTGCTGCTGTCTCAGATCTTTGTCCTCTCCTCGCTCTTGCCATTGCCCTCAATGGCGTCCAACCTGTTTTATCTGTTTTGGTTTGA 1305 0.3939 MSTTSTHIHKDIDQPLLASNEPTAEELPSSFTHSFGSKHESDGELERILSDTSLPFLKRLGLASWVEFKMLFYLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAKKYDMLGIYLQRSTVLLTIAGLILTLIYIFSKPLLIFLGESPEIASAASLFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAGTLVIHVILSYVAVYKFGLGLLGASLVLSFSWWIIVIAQFVYIVKSEKCKHTWKGFSFQAFSGLPEFFKLSASSAVMLCLETWYFQILVLLAGLLPNPELALDSLSICATVSGWTFMISVGFNAAASVRVSNELGAGNPKSASFSVLVVTVISFIICVILALVVLALRDVISYVFTDGEVVAAAVSDLCPLLALAIALNGVQPVLSVLV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4571 434 TIGRFAM matE: MATE efflux family protein 77 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa7g4571 434 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 431 - -
Psa7g4571 434 CDD MATE_eukaryotic 67 431 IPR045069 GO:0042910|GO:1990961
Psa7g4571 434 Pfam MatE 299 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa7g4571 434 Pfam MatE 77 237 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa7g4571 434 PANTHER PROTEIN DETOXIFICATION 21 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4571 Psa-Chr7 385262901 385269764 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4571 K03327 - gmx:100801718 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4571 7 385262901 385269764 Psa7g4571 7 385262901 385269764 ECH
Psa5g6064 5 519374513 519378259 Psa7g4571 7 385262901 385269764 PCT