Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g6064 ATGGATTCAGTGAACAAAAAATCCGCCGAAGGACCACTCTTATCACCTCCCAGCCATACGCCACCGGCGCACCATGAATCTGACGGCAAGCTTGAGAGAATTCTATCGGACACCACCGTGCCATACTTCCGCCGCATCCGTTCCGCCTCGTGGATTGAGCTTAAACTCCTTTTCTTCTTAGCCGCTCCAGCCGTGTTTGTTTATCTCACCAACTATGTTATGTCTATGGCCACACAAATCTTCTCCGGCCACCTTGGTAACCTTGAGCTCGCCGCCGCGTCGCTCGGGAACACCGGTATTCAGATATTTGCTTATGGCCTCATGTTGGGTATGGGAAGTGCAGTTGAAACTCTATGTGGACAAGCATATGGAGCAGAAAAATATGAAATGCTTGGAACTTACCTACAAAGATCAACAATTCTTCTAACAATAACCGGTTTATTCTTAACGGTTATTTATATCTTTAGCAAACCAATTCTGATAGCCATAGGACAATCACCAAGAATCTCTTCTTCTGCCGCGCTTTTCGTTTACGGGCTTATCCCACAAATATTCGCTTATGCGATAAACTTTCCGATTTCCAAGTTTCTTCAAGCACAGAGTATAGTTCTTCCAAGTGCATACATTGCAGCAGCAACATTGGTGGTTCATCTCGGACTAAGTTGGCTTGTTGTTTTTAAGATTGGGTGGGGATTAGTGGGAGCTTCTTCGGTTTTGAGTTTGTCGTGGTGGATTGTTGTTGTTGCTCAGTTTGTTTACATTGTGAAAAGTGAAAAGTGTAAGAAGACGTGGAATGGCTTTACTTTGGAGGCGTTTTCGGGTTTGCCGGAGTTTTTTAAACTGTCGGCGGCTTCCGCGGTTATGCTCTGTCTTGAATCTTGGTACTTTCAGATTCTGGTTTTGCTTGCTGGGCTTCTTCCTGAGCCTGAATTGGCTCTTGATTCTCTTTCTATTTGTACCACGGTTCTTGGATGGGTGTTCATGGTCTCAGTTGGATTCAACGCAGCTGCAAGTGTGAGGGTGAGCAACGAGCTAGGAGCAAGAAATCCAAAATCAGCTTCATTTTCGGTGAAAGTGGTGACATTGATATCATTTTTAGTATCAGTAATCTCGGCAGTAGTTGTGATTGCATTAAGGGATGTTATCAGCTATATTTTCACGGAGGGAGAAGTCGTGGCAGCCGCGGTCTCAGATCTTTGTCCAATCCTAGCTTTTTCTCTTGTTCTGAATGGCATTCAACCAGTCTTATCTGGTGTTGCTGTTGGTTGTGGATGGCAAGCTTTTGTTGCTTATGTGAATGTGGGTTGTTATTATCTAGTTGGTGTACCATTGGGTGTAATTCTAGGCTTTTACTTCAATTTTGGTGCTAAGGGACTGTGGCTAGGGATGCTTGGTGGAACTACTATGCAGACAATTATTCTGATGTGGGTCACATTTAGAACTGACTGGAACAAAGAGGTGGAAGCATCACTCCAGAGGTTGAACGAATGGGAAGATAAAAAGGAGCCCCTTCTAAATTCAGTAATTGCATAA 1533 0.4416 MDSVNKKSAEGPLLSPPSHTPPAHHESDGKLERILSDTTVPYFRRIRSASWIELKLLFFLAAPAVFVYLTNYVMSMATQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAYGAEKYEMLGTYLQRSTILLTITGLFLTVIYIFSKPILIAIGQSPRISSSAALFVYGLIPQIFAYAINFPISKFLQAQSIVLPSAYIAAATLVVHLGLSWLVVFKIGWGLVGASSVLSLSWWIVVVAQFVYIVKSEKCKKTWNGFTLEAFSGLPEFFKLSAASAVMLCLESWYFQILVLLAGLLPEPELALDSLSICTTVLGWVFMVSVGFNAAASVRVSNELGARNPKSASFSVKVVTLISFLVSVISAVVVIALRDVISYIFTEGEVVAAAVSDLCPILAFSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYLVGVPLGVILGFYFNFGAKGLWLGMLGGTTMQTIILMWVTFRTDWNKEVEASLQRLNEWEDKKEPLLNSVIA* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g6064 510 MobiDBLite consensus disorder prediction 1 30 - -
Psa5g6064 510 TIGRFAM matE: MATE efflux family protein 63 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g6064 510 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g6064 510 Pfam MatE 285 447 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g6064 510 Coils Coil 480 500 - -
Psa5g6064 510 PANTHER MULTIDRUG RESISTANCE PROTEIN 23 494 - -
Psa5g6064 510 CDD MATE_eukaryotic 53 488 IPR045069 GO:0042910|GO:1990961
Psa5g6064 510 PANTHER PROTEIN DETOXIFICATION 23 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g6064 Psa-Chr5 519374513 519378259 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g6064 K03327 - gmx:100801718 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g6064 5 519374513 519378259 Psa5g6064 5 519374513 519378259 ECH
Psa5g6064 5 519374513 519378259 Psa7g4571 7 385262901 385269764 PCT