Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4409 ATGAGATTCTCCAAAACCTCTCTGTCTCTTTTCTTGTTCTTCATTTTATTTTCTTCATCTCATGCAACTTCTCGCATCACACTTCAACAACCATTTCCAACAACAAAATTTTCATCGAATCAACGAGCTGAACAGCTTATAAGAAGCTTTAACTTATTTCCAAAGAATTCAGCTAATATACATGGTGAATACTCTATTGATGATTTCGTCCCAGGAAAAATCGTAGAGAAGACGTTTTCGTTTCTCGCCAGTTCTAATGGAACTTCCGTCGAAGATCTTGGTCACCATGCTGGATACTATTCGCTTCCTCGTTCCAAATCTGCGAGGATGTTCTATTTTTTCTTTGAATCAAGAAATGGTGCTAAGGATGCACCAGTTGTGTTATGGTTGACTGGAGGTCCAGGTTGTGCAAGTGAATTAGCTTTGTTTTATGAGAATGGACCTTTCAAAATTAACAATGATTTGTCTCTTTCATGGAATGAATATGGTTGGGACAAGGGATCAAATATTATTTTTGTTGATCAACCTATTGGGACAGGTTTTAGCTACAGTTCTGATGAAAATGATATTCCTACGGATGAAGCTGGTGTTAGCAATGATTTGTACACTTTCTTGCAGGCATTTTTCAAGGAACACCCTCAATTCGTTAAGAATGACTTTTATATTACCGGAGAATCATATGCTGGACATTATATTCCAGCTCTCGCATCCCGGGTTCACAAAGGAAACAAAAACAAAGAAGGAATTATTATAAACTTCAAGGGTTTAGCTATTGGTAATGGATTGACCAACCCAAGAATTCAATATCAAGCATACACTCAATTTGCACTTGATAACAAATTGATTACAAAGGAAGATAAAGCTGATATTGACAAATTGGTCCCATCTTGTCTAGATGCCACAAAAACTTGCGAGAGTGAAGGTGGAGATAGTTGCAATATAGCCGCAGATGAATGTGAGCAGATATTTTCCAGCATTCTTTCCGTTGCAGGCAATGTTAATTACTATGACATCAGAAAGAAATGCGAGGGGTCGTTGTGTTATGATTTCTCAAATGTGGAGACACTTTTAAATAAGAAGACAGTTAGGGATGCTTTAGGCGTTGGGGACATAGAGTTTGTTTCATGCAGCAATGAAGTGCATAGAGCTTTGAATCAAGATTTGATGAAAAACTATGAAGGGGATATTCCACCACTTCTTGAGGATGGAATCAAGGTTCTTATATATGTTGGAGAATTTGATCTTATTTGCAATTGGCTTGGGAATTCAAATTGGGTTCATGCTATGGAGTGGTCAGGTCAAAAACAGTTTGATGCATCCAAAACATCACAGTTTTTGGTTGATGGTACACAAGCAGGATTGTTGAATAGTTATGGACCTCTCTCTTTTCTAAAGGTGAATGGTGCTGGACATTTGGTTCCTATGGATCAACCAAAAGCTTCACTTCAGATGTTGGTAAACTGGATAGGAGGAAACCTTAATGGAACAAAAATTTAA 1497 0.3754 MRFSKTSLSLFLFFILFSSSHATSRITLQQPFPTTKFSSNQRAEQLIRSFNLFPKNSANIHGEYSIDDFVPGKIVEKTFSFLASSNGTSVEDLGHHAGYYSLPRSKSARMFYFFFESRNGAKDAPVVLWLTGGPGCASELALFYENGPFKINNDLSLSWNEYGWDKGSNIIFVDQPIGTGFSYSSDENDIPTDEAGVSNDLYTFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHKGNKNKEGIIINFKGLAIGNGLTNPRIQYQAYTQFALDNKLITKEDKADIDKLVPSCLDATKTCESEGGDSCNIAADECEQIFSSILSVAGNVNYYDIRKKCEGSLCYDFSNVETLLNKKTVRDALGVGDIEFVSCSNEVHRALNQDLMKNYEGDIPPLLEDGIKVLIYVGEFDLICNWLGNSNWVHAMEWSGQKQFDASKTSQFLVDGTQAGLLNSYGPLSFLKVNGAGHLVPMDQPKASLQMLVNWIGGNLNGTKI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4409 498 Gene3D alpha/beta hydrolase 74 496 IPR029058 -
Psa7g4409 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Psa7g4409 498 Pfam Serine carboxypeptidase 92 490 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 35 492 - -
Psa7g4409 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 492 IPR001563 GO:0004185|GO:0006508
Psa7g4409 498 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Psa7g4409 498 SUPERFAMILY alpha/beta-Hydrolases 94 491 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4409 Psa-Chr7 362190168 362192903 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4409 K16298 - gmx:100798795 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4409 7 362190168 362192903 Psa7g4409 7 362190168 362192903 ECH
Psa7g4409 7 362190168 362192903 Psa5g6456 5 546506574 546509069 PCT