Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4316 ATGACAAGCTTTTCCTTCTTCAAGTCACTTTTTTTCTTTCTTCTCATCATTTCAGATTCATTTATGCAAATCAATTGCCTAAGTTGTGGAATAAACTATGGACAAATAGCAAACAATCTACCATCTCCTTCTAGAGTAGCTGTTCTCATAAGATCCATGAATGTCACAAAGATTAAACTCTATGATGCTAATCCAAATGTTCTACTTGCTTTCTCTCAATCAAATGTTGAATTTGTTATAGGACTTGGAAATGAGAATCTTCAAAATATGACAAACCCTTCCAAAGCTCAAAATTGGATTCAACAACATGTTCTACCTTATCTTTCACAAACCAAAATAACTTGCATAAATGTTGGAAATGAAGTTCTCAATAGCAACAACACTCAAATGATGTTAAACCTTTTACCTTCGATGCGAAATGTTCATACCGCCCTTGTTAATCTCGGGTTAGACCGATTAATCAGTGTTGCGACAGCTTTTTCTTTCAACGTTTTGGAAAATTCTTACCCTCCTTCATCTGGTTCTTTTAAGCAAGATTTGATTCAATATATTCAACCACTAGTTGAATTTCTTGATGAAATGAAATCACCTTTTCTTATTAATGCTTACCCTTTTTTTGCATACAGAGATAACCCTAATGAGGTACCTTTAAACTATGCACTTTTTCAACCAAATCAAGGTTTGGTGGATCCAAATACAAATTTGCATTATGATAACATGTTGTATGCACAAATGGATGCTGTTTATGCTGCAATCAAAGTGCTAGGGTTTACAAATATTGAAGTTAGGGTTTTTGAGACAGGTTGGCCTTCTAAGGGTGATTCTGATGAAATTGGAGCTACTATACAAAATGCAAAACTGTATAATGGAAATTTGCTTAGAAGAATTGAAGAAAAACAAGGAACTCCTGGAAAGCCTTTGGTTCCAATTGATGTATATGTTTTTGCACTTTTTAATGAAGATTTGAAAAATGGTCCTGCTTCAGAAAGAAACTATGGTCTTTATTATCCAAATGGTAGCCCAGTTTATAACATTGGATTGCAAGGTTATCTCCCACAAATGGCTCTGCCATCCAAATCTAATGTTTTGTCTTTCAATTTTGTTGTATGGATAGTAGTTACATACTTGATCTTTGCTTGGGAGCTTTGA 1149 0.3403 MTSFSFFKSLFFFLLIISDSFMQINCLSCGINYGQIANNLPSPSRVAVLIRSMNVTKIKLYDANPNVLLAFSQSNVEFVIGLGNENLQNMTNPSKAQNWIQQHVLPYLSQTKITCINVGNEVLNSNNTQMMLNLLPSMRNVHTALVNLGLDRLISVATAFSFNVLENSYPPSSGSFKQDLIQYIQPLVEFLDEMKSPFLINAYPFFAYRDNPNEVPLNYALFQPNQGLVDPNTNLHYDNMLYAQMDAVYAAIKVLGFTNIEVRVFETGWPSKGDSDEIGATIQNAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDLKNGPASERNYGLYYPNGSPVYNIGLQGYLPQMALPSKSNVLSFNFVVWIVVTYLIFAWEL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4316 382 Pfam Glycosyl hydrolases family 17 30 345 IPR000490 GO:0004553|GO:0005975
Psa7g4316 382 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 361 IPR044965 GO:0004553|GO:0005975
Psa7g4316 382 Gene3D Glycosidases 28 351 - -
Psa7g4316 382 SUPERFAMILY (Trans)glycosidases 30 346 IPR017853 -
Psa7g4316 382 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4316 Psa-Chr7 351134608 351136570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4316 79 380 Glycoside Hydrolase AT2G27500 61.716 1.28e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4316 - - ccaj:109798347 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4316 7 351134608 351136570 Psa7g4316 7 351134608 351136570 ECH
Psa5g6497 5 548852012 548853854 Psa7g4316 7 351134608 351136570 PCT