Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g4312 | ATGGAAATCGGTCACCCCACTAACGTGCGCCATGTTGCTCATGTTACCTTTGATAGGTTCAATGGTTTCTTGGGTTTACCTCTTGAGTTTAAACCTCAACTCCCCACTATACCTCCTAGTGCAAGTGCAACTGTTTTTGGAGTTTCGACAGAATCTATGAAATTATCATATGATACAAGAGGGAACATTGTGCCAACAATTCTACTACTAATGCAAAGACACTTGTATGCTCAAGGAGGATTACAGGCAGAGGGAATTTTCAGAATTAATGCAGGTAATAATCGAGAGGAATATGTCCGGGAACAGTTAAACAAGGGAGTGGTTCCTCAAGACATTGATGTACATTGTTTAGCAGGATTGATTAAGGCTTGGTTTAGGGAGCTGCCAAGAGGTATTTTGGATTCTTTATCTCCGGAGCAGGTAATGCAATGTCAAACAGAAGAGGATTGTGCGGAACTGGCGAATCAGCTACCTCATACCGAAGCTTCCCTTTTGGAATGGACTATCAATCTGATGGCTGATGTTGTTCAAGAGGAGCCTCTCAATAAGATGAATGCACGCAACATTGCTATGGTTTTTGCACCAAACATGACTCGGATGGTAGATCGTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTGTATCAAGGACACTAAAGGCAAGAAAGGAAGGATTCTGA | 699 | 0.4192 | MEIGHPTNVRHVAHVTFDRFNGFLGLPLEFKPQLPTIPPSASATVFGVSTESMKLSYDTRGNIVPTILLLMQRHLYAQGGLQAEGIFRINAGNNREEYVREQLNKGVVPQDIDVHCLAGLIKAWFRELPRGILDSLSPEQVMQCQTEEDCAELANQLPHTEASLLEWTINLMADVVQEEPLNKMNARNIAMVFAPNMTRMVDRLTALMYAVQVMNFLKTLVSRTLKARKEGF* | 233 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g4312 | 232 | SMART | PBD_5 | 3 | 37 | IPR000095 | - | |
| Psa7g4312 | 232 | Gene3D | Rho GTPase activation protein | 37 | 230 | IPR008936 | GO:0007165 | |
| Psa7g4312 | 232 | SUPERFAMILY | GTPase activation domain, GAP | 43 | 222 | IPR008936 | GO:0007165 | |
| Psa7g4312 | 232 | CDD | CRIB | 1 | 44 | - | - | |
| Psa7g4312 | 232 | Pfam | RhoGAP domain | 65 | 199 | IPR000198 | GO:0007165 | |
| Psa7g4312 | 232 | ProSiteProfiles | Rho GTPase-activating proteins domain profile. | 48 | 232 | IPR000198 | GO:0007165 | |
| Psa7g4312 | 232 | Pfam | P21-Rho-binding domain | 2 | 29 | IPR000095 | - | |
| Psa7g4312 | 232 | SMART | RhoGAP_3 | 62 | 225 | IPR000198 | GO:0007165 | |
| Psa7g4312 | 232 | PANTHER | PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN | 1 | 230 | - | - | |
| Psa7g4312 | 232 | CDD | RhoGAP | 65 | 222 | - | - | |
| Psa7g4312 | 232 | PANTHER | MKIAA1688 PROTEIN | 1 | 230 | IPR044785 | GO:0005096 | |
| Psa7g4312 | 232 | ProSiteProfiles | CRIB domain profile. | 3 | 16 | IPR000095 | - | |
| Psa7g4312 | 232 | Gene3D | CRIB domain | 1 | 36 | IPR036936 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g4312 | Psa-Chr7 | 350941568 | 350943301 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g4312 | - | K20642 | mtr:MTR_4g052850 | 411.379 |
Event-related genes