Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3972 ATGGATCTACTAACCATCACTCTCATTACTTTTCTTTTCCTCACTCCCAAAGGTATCACTGGTTCTTCCTTCACATTCGTAAACAGATGCGACTACACAGTATGGCCAGGCATTCTCGCAAATGCCGGTAGCCCAACTCTCGGAAGCACCGGTTTTGAACTTCCCCAAGAAACCACTCGCTCATTTCAAGCTCCAGCCGGTTGGTCCGGCCGATTCTGGGCACGAACAGGTTGTAACTTCGACGGATCCGGGTCCGGTTCATGTCTCACCGGAGACTGCGGTTCCGGCATGATAGAATGCAACGGCGCCGGAGCTGCTCCACCAGCTACCCTCGCAGAGTTCACTCTCGGAACCATAGGACAAGATTTCTACGACGTGAGTCTTGTAGACGGTTACAATCTACCCATGATCGTTGAAGGCTCGGGTGGGTCCGGCATGTGTGAATCAACTGGCTGTACGTCAGATCTTAACCAGCAATGTCCGGCGGAGTTGAGAGCCTCAGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGTAGTCCTGAGTATTGCTGTAGCGGCGCGTATGGTTCACCGGCGACTTGTAGACCTTCTGTTTACTCGGAGATGTTTAAAGCTGCTTGTCCTAGATCGTATAGCTACGCTTACGATGATGCGTCGAGTACTTTTACATGTACTGCTGCAGATTATACCGTTACCTTTTGTCCATCTTCTCCAAGTAAAAAATCTTCGCAATATCCAACTCCAGTGAGCTCAACAACGTTACCAGGGACAGGGACAGTGATAGGGACTCCTGAGATTGGAACAGGATCTGAAGGGGGAGTGGAATACATGGGTACGGGTTCGGCCACACCGATAGGGTATTCGGTACCTGTTAATTCAGGGACAGGATCTGGATCTGGAGGAGAGACCATGCTTGCAGATGGGTCATATTTAGCTGGATTGGCCATGGGAGATTCTTCTACAACAGTTTCTTCTGTGTTTCATTACTCTTTTGGCTTTTTGCTTGTTATGTTCTTGCTTTAG 1029 0.4956 MDLLTITLITFLFLTPKGITGSSFTFVNRCDYTVWPGILANAGSPTLGSTGFELPQETTRSFQAPAGWSGRFWARTGCNFDGSGSGSCLTGDCGSGMIECNGAGAAPPATLAEFTLGTIGQDFYDVSLVDGYNLPMIVEGSGGSGMCESTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPATCRPSVYSEMFKAACPRSYSYAYDDASSTFTCTAADYTVTFCPSSPSKKSSQYPTPVSSTTLPGTGTVIGTPEIGTGSEGGVEYMGTGSATPIGYSVPVNSGTGSGSGGETMLADGSYLAGLAMGDSSTTVSSVFHYSFGFLLVMFLL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3972 342 Gene3D Thaumatin 22 237 IPR037176 -
Psa7g3972 342 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 262 - -
Psa7g3972 342 PANTHER OS03G0233200 PROTEIN 10 262 IPR001938 -
Psa7g3972 342 SMART tha2 24 237 IPR001938 -
Psa7g3972 342 CDD TLP-PA 23 236 - -
Psa7g3972 342 PRINTS Pathogenesis-related protein signature 23 35 IPR001938 -
Psa7g3972 342 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Psa7g3972 342 PRINTS Pathogenesis-related protein signature 84 113 IPR001938 -
Psa7g3972 342 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Psa7g3972 342 PRINTS Pathogenesis-related protein signature 227 236 IPR001938 -
Psa7g3972 342 ProSitePatterns Thaumatin family signature. 84 100 IPR017949 -
Psa7g3972 342 SUPERFAMILY Osmotin, thaumatin-like protein 24 238 IPR037176 -
Psa7g3972 342 Pfam Thaumatin family 28 237 IPR001938 -
Psa7g3972 342 ProSiteProfiles Thaumatin family profile. 21 237 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3972 Psa-Chr7 328626505 328628127 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3972 4 245 Receptor kinase-like Gene Family AT5G38280 46.512 4.85e-76 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3972 - - cam:101493007 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3972 7 328626505 328628127 Psa7g3972 7 328626505 328628127 ECH
Psa7g3972 7 328626505 328628127 Psa2g3495 2 384055637 384057515 ECH