Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3495 ATGGGTCTATTCTTAAATAACCAACATTATCTTCAACCCATCTCATGCTTCTTACTCTTCCTTCTTTTCAAAGGGGTTTCAGTTTCAGGGGCAACATTTACGTTTCTGAATAAATGCGATTACACAGTATGGCCAGGAATTTACGGAAAACCGGAACTTGGAACAACCGGTTTCCAGCTCACAAAAGGAGCATCCAGAACCTTCCAAGCACCCACCGGTTGGTCCGGTAGATTCTGGGCGAGAACCGGTTGTCAATTTGACGACTCCGGCCACGGAACATGCTCCACCGCCGACTGCGGCTCCGGTGAAATCTCCTGCAACGGAGCAACAGCTTCACCGCCAGCAACACTCGCTGAATTCACACTCGGAACCGGTTCGTTGGATTTCTACGACGTAAGCCTCGTCGACGGTTACAATCTCCCGATGCTGGTAACCACGAGCGGCGGGACAGGCACATGCGCCGTCACAGGATGTAGTACTGATATCAATAAGAAGTGTCCATCGGAATTGAAAGCCGCAAACGGTGGCGCGTGCAATAGTGCTTGTGGTGCGTTTGGGAAACCGGAGTATTGTTGTAACGGTGCGTTTAGTAACCCGGACACGTGTAAGCCTTCTGTTTATTCAGAAATGTTTAAATCGGCGTGTCCAAAATCTTATAGCTACGCTTATGATGATGCAACTAGCACTTTTACTTGTTCTGGTGCTGATTATACAATCACATTTTGTCCTTCTTCTACACCTAGTCTAAAGTCAGCAACGGATTCGGATTCTAATAATACGAAGGAGACGGGTAATTCGGCTTCGGGGAGTGGCTCGGAGCAATCGGAACTGGCCTCAGCTTCGTGGCTGGCTTATATGGCTACGGCTTCTGAGGCTTCTATGAGGAGCAGAACTTCAATGGTTTCTTTGTTGTTGTTGGTTGGTTTTATTTTTAATGTTTTTGTGTTTCATTGA 954 0.4727 MGLFLNNQHYLQPISCFLLFLLFKGVSVSGATFTFLNKCDYTVWPGIYGKPELGTTGFQLTKGASRTFQAPTGWSGRFWARTGCQFDDSGHGTCSTADCGSGEISCNGATASPPATLAEFTLGTGSLDFYDVSLVDGYNLPMLVTTSGGTGTCAVTGCSTDINKKCPSELKAANGGACNSACGAFGKPEYCCNGAFSNPDTCKPSVYSEMFKSACPKSYSYAYDDATSTFTCSGADYTITFCPSSTPSLKSATDSDSNNTKETGNSASGSGSEQSELASASWLAYMATASEASMRSRTSMVSLLLLVGFIFNVFVFH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3495 317 Gene3D Thaumatin 31 243 IPR037176 -
Psa2g3495 317 CDD TLP-PA 32 242 - -
Psa2g3495 317 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 22 262 - -
Psa2g3495 317 SMART tha2 33 243 IPR001938 -
Psa2g3495 317 Pfam Thaumatin family 37 243 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 90 119 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Psa2g3495 317 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Psa2g3495 317 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Psa2g3495 317 MobiDBLite consensus disorder prediction 252 273 - -
Psa2g3495 317 SUPERFAMILY Osmotin, thaumatin-like protein 31 244 IPR037176 -
Psa2g3495 317 ProSiteProfiles Thaumatin family profile. 30 243 IPR001938 -
Psa2g3495 317 PANTHER OS03G0233200 PROTEIN 22 262 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3495 Psa-Chr2 384055637 384057515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3495 18 262 Receptor kinase-like Gene Family AT5G38280 46.360 2.43e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3495 - - gmx:100815652 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3495 2 384055637 384057515 Psa2g3495 2 384055637 384057515 ECH
Psa7g3972 7 328626505 328628127 Psa2g3495 2 384055637 384057515 ECH