Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3287 ATGCAAAAAGAAACGTTGGAAGAGCTTCAGAGGGGGATAGATACTCAAAAGCAAGAATTTAACGAGAAGTTAGAAACGGAGCGGGAAACTCGCAGAAAAGGATTGGAAGAATTAAAAGAGTTATATGCGAGAATCAGAGGAACTGTCCTTCAGTGTACAAATGAAGATGATGATGTTGATGATCAATTGTCTAATAGAAATATTCTACGTGTATTTTCTCCAATGGAACACTTTGGAAGCATTACTCAGTTTCTTGAAGATAAAAATGTGTTGGTCCTTGGTGCTGCTGGATTCCTTGCAAAAATATTTTCTCCAATGGAACACTTTGGAAGCATTACTCAGTTTCTTGAAGATAAAAATGTGTTGGTCCTTGGTGCTGCTGGATTCCTTGCAAAAATTTTTGTGGAGAAGATACTAAGAGTGCAACCAAATGTGAAGAAAGTTTATCTTCTTTTGAGAGCTGCAGATGCTGATTCTGCAACTAAACGGTTGCATAATGAGATTTTGAAGAAGGACTTGTTCAAATTGCTGAAGGAAAATCATGGTGAAAAGTTCAATAGCTTTATTTCAGAAAAAGTGACTGTAGTGCCTGGAGACATTTCCCAAGAAGAGTTCAACTTGAAGGACTCAAATCTAGTTAAAGAGTTGTACAATGAAACTAATGTCATAGTGAATTTAGCTGCAACAACTAACTTTGATGAAAGATATGATGCCGCATTGGATTTAAATACATTTGGAGTGAAGCATGTATTAAACTTCGCCAAAAACTGTATTAATCTGAGGGTGCTTGTTCATGTATCAACAGGAGGATTGATTACAGAAGAACATTATAAATGGGGAGCTTCTGAAAATGATGTTAAATTTGGCCATGAAGGATTTGGCATCAAAAGAGCAAAAATGTATTGGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGAGAGAATGCTTGTTGGAATATGAAGGAAAATCTAGCCCATTGTTATTAACCATAGACAGTATAATTGTGGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCTGACATTGAAGCTGTTTTTGATGTGATTCCAGCTGATATAGTAGTGAATGCAATGATGGTGGCAATGACGAAACATGCTAATCAATCTATTGATGATAACATATATCATGTGGGTTCTTCCGTTGGAAATCCAGTTAGATATCGTAATCTCAAAGATTACACTTTCAGATATTTTACTGCAAAACCATGTTTAGACAAAGAAGGAAAACCCATCAAGGTTGGCACAGTTACGGTTTTGGAAAACATGAATAGCTTCCAAAGATACATGTACATTCGATACATGCTTCCACTCAAGGGACTAGAGCTAGTGAATACGGCCTTTTGTCACTTTTTTGATGGTACTTATTTTGATATTAACAAGAAGGTCCAAACCGTGATGCGCTTGGTTGATCTCTACAAACCCTACTTGTTCTTCGACGGCTTATTCGATAATACGAATGCGGAGAAGATGCAAAAAGAAGCAAGACAAAGTGGGGTGGAGATGGATTTGTTTTACTTTGACCCCAAGATGATTGACTGGGAAGACTACTTCAACTTACAAGTGTAA 1593 0.3685 MQKETLEELQRGIDTQKQEFNEKLETERETRRKGLEELKELYARIRGTVLQCTNEDDDVDDQLSNRNILRVFSPMEHFGSITQFLEDKNVLVLGAAGFLAKIFSPMEHFGSITQFLEDKNVLVLGAAGFLAKIFVEKILRVQPNVKKVYLLLRAADADSATKRLHNEILKKDLFKLLKENHGEKFNSFISEKVTVVPGDISQEEFNLKDSNLVKELYNETNVIVNLAATTNFDERYDAALDLNTFGVKHVLNFAKNCINLRVLVHVSTGGLITEEHYKWGASENDVKFGHEGFGIKRAKMYWDGQTHMCLQKQWRECLLEYEGKSSPLLLTIDSIIVAYGKGKLTCFLADIEAVFDVIPADIVVNAMMVAMTKHANQSIDDNIYHVGSSVGNPVRYRNLKDYTFRYFTAKPCLDKEGKPIKVGTVTVLENMNSFQRYMYIRYMLPLKGLELVNTAFCHFFDGTYFDINKKVQTVMRLVDLYKPYLFFDGLFDNTNAEKMQKEARQSGVEMDLFYFDPKMIDWEDYFNLQV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3287 530 CDD FAR_C 440 526 IPR033640 -
Psa7g3287 530 MobiDBLite consensus disorder prediction 1 31 - -
Psa7g3287 530 Pfam Male sterility protein 125 277 IPR013120 -
Psa7g3287 530 PANTHER FATTY ACYL-COA REDUCTASE 77 103 - -
Psa7g3287 530 PANTHER FATTY ACYL-COA REDUCTASE 108 272 - -
Psa7g3287 530 PANTHER FATTY ACYL-COA REDUCTASE 331 526 - -
Psa7g3287 530 Pfam Male sterility protein 441 527 IPR033640 -
Psa7g3287 530 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 115 411 IPR036291 -
Psa7g3287 530 Coils Coil 6 41 - -
Psa7g3287 530 Gene3D - 326 432 - -
Psa7g3287 530 Gene3D - 112 292 - -
Psa7g3287 530 PANTHER MALE STERILITY PROTEIN 2-RELATED 331 526 IPR026055 GO:0080019
Psa7g3287 530 PANTHER MALE STERILITY PROTEIN 2-RELATED 108 272 IPR026055 GO:0080019
Psa7g3287 530 PANTHER MALE STERILITY PROTEIN 2-RELATED 77 103 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3287 Psa-Chr7 248424001 248430006 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3287 114 447 Acyl Lipid Metabolism Gene Families AT5G22500 43.478 9.30e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3287 K13356 - gmx:100793197 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5898 5 508966051 508968990 Psa7g3287 7 248424001 248430006 PCT