Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3226 ATGGGAGCTATTGGTGGGGAAGAGTTGTCGAAATGGGAGAAGATGCAAGGAGTGACGAGTGGTTGCGAAGAGAAGATCCTTGTGTTAGTGAGGCTTAGGCCTTTGAGTGAGAAGGAAATTTCTGGGAATGAATCTGCAGATTGGGAATGTATTAATGATACTACTGTCTTTTATCGGAACACATTGCGCGAGGGTTCTACATTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGCTACAAAGCAGGTATATGAGGAAGGAGCCAGAGAAATTGCTCTTTCAGTTGTTGGTGGAATTAACTCGAGTATTTTTGCTTATGGGCAAACAAGCAGCGGAAAGACATACACTATGGTTGGAATAACTGAATATGCTGTAGCAGATATTTTTGACTACATACAAATGCATGAAGAAAGAGCATTTGTATTGAAGTTCTCAGCAATTGAAATTTACAATGAAATTGTTAGAGACCTCCTCAGCACTGACAACACTCCACTTAGGCTGCGTGATGATCCTGAGAAAGGACCCGTTTTAGAGAAACTTACCGAAGAGACTCTACAGGACTGGGGGCATTTGAAAGAGCTACTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATTAGATTGACGATGGAAAGTTCTGCCAAGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGTGAGCGTGCATCTCAGGTATCGTCAGCTGGGGTGAGATTGAAAGAAGGTTGTCATATAAACCGGAGTTTACTTACTCTTTCAACCGTCATTCGTAAGCTTAGTAAGGGAAAACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTACAGCCCTGCTTAGGTGGCAATGCTAGAACAGCTGTCGTTTGCACTTTGAGCCCTGCGCGGAGTCACGTTGAGCAAACTAGAAACACGCTTCTTTTTGCTTGTTGCGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGAGAGTTAAAAACTCCTGCTACTGCCAATTGTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAAGAGATTAGGGAGCTAACTAAGCAACGAGATCTTGCTGAATCAAGGATTGAGGATTTGCTTCGCACGGTGGGAAAGGAGCAGATATCTAAAGAAGAAGAAGAAATATGGGAAGATGACTCTTCAGTGTCAGAGTCATCAAGCATTTGCGGTCCCAATACACGCATTAGAGAGTTCAACAATCCTCACTATAATGGTGGAGACAGTGGAAGTTATCGAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAGGAGTCAAGTAGAGACAACTCAGAATACCTCGATCCATCGGTAAATGACAACGGGGATTCGGATTTGACAGTATCTGAAGGGGAAAATGTATCAGACCATGGAATATCTACACGTTTGAATGAAGACAACCGTGATGAACATGTAATGTCAGGAAACATGTCAAATCATAGAAATCTCAATTTAACTAGAAGCTGGAGTTGTTCGAGGTATCGCATGACTGGTTCTCCTGAGACAGGAGAAATGGAGAGGACTCCAGCCAATGGATTTGAAAAAGGACTCCCTGGAAGACCAGATGGTTTGTGGAGAAAGTTCAATCCATTAAATTACGATGGTTCCAAAAGTTTTTCAAGGCACGATTCTCAGTCTTCTATTGAAAGTCAGTCAGTGGATGATGAACATAGAGGCAACAGCATGGGAATATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGAATGAAAGAAATGGTTAAACTTGAATATGAAAAGCAGTTCGTTGATGGTCAGGACCAGGAGACAGAAAGAAAACCAATGAAGTTTGATAGGAATGTGAAAGATGTAGGCATTGATCCCATGCTCGAGGCACCGGGAACTCCTTTCGATTGGTCTCTGCAGTTTAAGAGACAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTGCCATTAACCCACAGGACCTACTTCTTTCTTTTGTTCAGGGGTGAACAAACAGACTCCATTTACATGGAGGTAGAGCTCAGAAGACTATGCTTCCTCAAAGAAACATTTTTTGATGAAAACCAGTCTGATAGAAACAGCCAACCAATCACATTAACTAAAAGTGTGAAAGCTCTTCGAAGGGAGAGAGAAATGCTTGTGAAGCTTATGCAGAAGAGGTTTTCTGAGGAAGAAAGGAAAAGGATATTCAAAGAATGGGGTATTGGATTGAACTCAAAGCGCAGGAGGATGCAGCTTGCAAACCGTCTATGGAGCAATACTGATATGAACCACGTAATGCAGAGTGCTGCAGTAGTTGCGAGGTTAGTAAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAACTCACACGACTCACACGACGAAGAAATTCATGGAAAAGTACCAGAGCATCTCTTCCATAG 2640 0.422 MGAIGGEELSKWEKMQGVTSGCEEKILVLVRLRPLSEKEISGNESADWECINDTTVFYRNTLREGSTFPSAYTFDRVFRGDCATKQVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEYAVADIFDYIQMHEERAFVLKFSAIEIYNEIVRDLLSTDNTPLRLRDDPEKGPVLEKLTEETLQDWGHLKELLSFCEAQRQVGETYLNEKSSRSHQIIRLTMESSAKEFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGKHGHINYRDSKLTRILQPCLGGNARTAVVCTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATANCDYVALLRKKDQQIEKMDKEIRELTKQRDLAESRIEDLLRTVGKEQISKEEEEIWEDDSSVSESSSICGPNTRIREFNNPHYNGGDSGSYRDEEDLDEYCKEVRCVELEESSRDNSEYLDPSVNDNGDSDLTVSEGENVSDHGISTRLNEDNRDEHVMSGNMSNHRNLNLTRSWSCSRYRMTGSPETGEMERTPANGFEKGLPGRPDGLWRKFNPLNYDGSKSFSRHDSQSSIESQSVDDEHRGNSMGISGDEDITSIHTFVAGMKEMVKLEYEKQFVDGQDQETERKPMKFDRNVKDVGIDPMLEAPGTPFDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSDRNSQPITLTKSVKALRREREMLVKLMQKRFSEEERKRIFKEWGIGLNSKRRRMQLANRLWSNTDMNHVMQSAAVVARLVRFSEQGRALKEMFGLSFTPQLTRLTRRRNSWKSTRASLP* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3226 879 Pfam Kinesin motor domain 31 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 MobiDBLite consensus disorder prediction 617 632 - -
Psa7g3226 879 CDD KISc_CENP_E 25 347 - -
Psa7g3226 879 Gene3D Kinesin motor domain 18 377 IPR036961 -
Psa7g3226 879 SMART kinesin_4 23 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 MobiDBLite consensus disorder prediction 567 590 - -
Psa7g3226 879 PANTHER KINESIN-LIKE PROTEIN KIN-7F 6 878 - -
Psa7g3226 879 PANTHER CENTROMERE PROTEIN E 6 878 - -
Psa7g3226 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 379 IPR027417 -
Psa7g3226 879 ProSitePatterns Kinesin motor domain signature. 246 257 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa7g3226 879 MobiDBLite consensus disorder prediction 606 635 - -
Psa7g3226 879 ProSiteProfiles Kinesin motor domain profile. 25 347 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 Coils Coil 391 425 - -
Psa7g3226 879 MobiDBLite consensus disorder prediction 434 456 - -
Psa7g3226 879 Pfam Domain of unknown function (DUF3490) 701 860 IPR021881 -
Psa7g3226 879 PRINTS Kinesin heavy chain signature 102 123 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 PRINTS Kinesin heavy chain signature 211 228 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 PRINTS Kinesin heavy chain signature 247 265 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 PRINTS Kinesin heavy chain signature 297 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa7g3226 879 Coils Coil 356 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3226 Psa-Chr7 241760101 241767680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3226 22 378 Miscellaneous Gene Families AT5G06670 41.873 2.52e-78 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3226 K11498 - gmx:100820012 1265.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3226 7 241760101 241767680 Psa7g3226 7 241760101 241767680 ECH
Psa7g3226 7 241760101 241767680 Psa4g2271 4 184841908 184848788 PCT