Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2271 ATGAGTGGTATAACTGAGTACGCTATAGCTGACATTTTTAATCACATAGAGAAGCACAAAGAAAGGGAATTTGTCTTGAAGTTTTCAGCAATGGAGATCTATAATGAATCTGTCAGGGACCTCCTTAGTACCGACACCACACCTCTCAGACTTCTTGATGATCCAGAGAAAGGCACAGTTGTTGAGAAGCTCACCGAGGAAACTTTGCGTGACTGGAACCATTTTACCGAACTTATTTCTTTCTGTGAAACACAACGTCAGATAGGAGAGACATCTTTGAATGAAGCCAGCTCCAGATCACATCAAATTCTAAGACTGACTATTGAAAGTTCTGCAAGTGAATTTCTGGGAAATGACAAATTGAGCTCTCTTTCTGCTTCTGTGAATTTTGTTGATCTTGCTGGAAGTGAGCGAGCATCACAAACAAATTCAGCTGGTGCGAGGTTGAAGGAGGGATGTCACATAAACCGTAGTTTACTGACTCTAGGAACTGTCATCCGCAAACTCAGCAAGGGGCGAAATGGACACATCCCTTTCAGAGATTCAAAACTAACCCGCATACTGCAGTCCTCAATAGGAGGCAATGCTAGAACAGCAATCATATGTACCATGAGTCCTGCGCGGAGCTATGTTGAACAAACCAGAAACACCCTCTTATTTGCATGTTGTGCTAAAGAAGTGTCAACTAATGCAAAAGTCAATGTAGTGATGTCTGATAAACTGTTGGTCAAGCAATTGCAAAGAGAGTTGTCTAGGCTGGAAGGAGAGTTGAGAAATTCAAGCTCAACCCGCCGTAAACCTGATTCTGCAGAGTTGCTGAAGGAAAAAGACCTCCAAATTGAGATGTTAAAGAAAGAGATAATGGATCTGGCTATGCAGCGGGACCTTGCTCACTCTCAAATTACGGACATGCTTAAAGTGGTTGGAGACGATATGTCCTCAAGTGATATGGAAAGTTTGGGTCCTCAGTATCCCAAACTACGTGTGCGATGCTCAATGGACTTTGATAATCAAATAGAGGAACCAAATTTATTAGGTTTTGACACCTTGCAGACTGTTAGATCTTTTGATGCTTCTCAATATTCAGATGGACATAGTGTAAGCTCCGAAGAGAGCTATTTCCAGCTCCCTGATTTGGAAAAGAATCTTCCCATCAGGATATTTTCTCAAGCGCTGTCAGTTGTAAGTCAGGAAGATGAAACAAATGATTCGGATAAGAAGATAGTTCAAGAACAGCCCAATGATAAATTAGGAGACAGTTATATGAAAGTTAGGTGCATTGAGTCAGAAGATCCAATGACAAACACAGATACACTTTCAAATCCAGCAAGTTTGAGTCCAAATAGAGACACAGACTCAAATGCATCATCTCCGGGGGAAACTACCGTTGTCTCAGGATTGACGGAAGTTGATAACATAGACAAAGAAAATCAAGACTTGTGCTCATCTCCGGGGGAAACTACGGTTGTCTCAGGATTGACGGAAGTTGATAACATAGACAAAGAAAATCAAGACTTGTGCTCATCTCCGGGGGAAAATATGGCTATCTCAGGATTGACAGAAGTTGTTAATATCGACAAAGAAAATCAAGACTCGTGTTCATTTGGGTTAAAGGAAAGAAAAGAATTGAGTCGCTTTCACCAAGCTTCTTTTCTTCCGTCTTCAGAGAAAATAAGTCCATCGATGGTAGGAAATAGTGTATCCAGTTCTAGAATCTTGAAATTGACCAGAAGCAGAAGCTGTGCAGCAAGTCTCATGAAGGATTCATCTTCCGATTGGTTTGACCAGGAAGAAATAATCCAGAACACCCCTCCAATAGGGATCCATAAAGACCAGATTAGAAGACCAGAGGGATATGATAGGAGGACCTATACACTAAACTATAATCCCAATGCTGATAGGTTATCCTGGTCTGGTTTTGGGAATTGTGTGAGATGTTCTACAGTTGACATGCAGAGCGTGAAACCATCATTTGATATGGAAATTGATGATGGTGATTTATCCCCGGTAAGAAGGGAAAAGAAAGAATGTGAAAGTTCAAAACCACCACCTTACCGTAAGGTTTCGGGGACTGGAGTTGAGTCCACTGTTTCTGCCAAAAAGTTCAAAGATGCTGGGTCGAACACATTACAATCTAATGAAGAAAAACATTTCGAATGGTCTTCAGAATTTAGGCGGCTGCAGAAAGAGATTATTGAACGCTGGCATTCTTGTAATGTTTCATTGGTCCACAGGACTTACTTTTTCCTTCTATTCAAAGGGGACTCTTCAGATTCTATCTATATGGAGGTAGAGCTGAGAAGGCTATCCTATCTCAAAGAGAATCAAATTTTGGAAGATGGACGAACCCTTACCCCTGAATCAAGCAAGAGATATCTTCGACGAGAGAGACAAATGTTGAGCAGACAAATGGAGAGGAAGTTGTCAAAATCTGAAAGAGAGAAAATGTATTTCAAGTGGGGGATTAGTATAAGTTCAAAGCATAGGAGGTTGCAATTGGCTCATCGCCTTTGGTCAGAAACAGATATAGACCATGTTAGAGAGAGTGCCACCATTGTTGCAAAGCTGGTTGGTACAGTTGAGCCAGATCAGGCTTTCAAGGAGATGTTTGGCCTCAACTTTGCACCAAGGCGCACAAGAAAGAAAACTTTTGGTTGGACGTCCAGTGTGAAGCATATTTTGTGA 2685 0.4138 MSGITEYAIADIFNHIEKHKEREFVLKFSAMEIYNESVRDLLSTDTTPLRLLDDPEKGTVVEKLTEETLRDWNHFTELISFCETQRQIGETSLNEASSRSHQILRLTIESSASEFLGNDKLSSLSASVNFVDLAGSERASQTNSAGARLKEGCHINRSLLTLGTVIRKLSKGRNGHIPFRDSKLTRILQSSIGGNARTAIICTMSPARSYVEQTRNTLLFACCAKEVSTNAKVNVVMSDKLLVKQLQRELSRLEGELRNSSSTRRKPDSAELLKEKDLQIEMLKKEIMDLAMQRDLAHSQITDMLKVVGDDMSSSDMESLGPQYPKLRVRCSMDFDNQIEEPNLLGFDTLQTVRSFDASQYSDGHSVSSEESYFQLPDLEKNLPIRIFSQALSVVSQEDETNDSDKKIVQEQPNDKLGDSYMKVRCIESEDPMTNTDTLSNPASLSPNRDTDSNASSPGETTVVSGLTEVDNIDKENQDLCSSPGETTVVSGLTEVDNIDKENQDLCSSPGENMAISGLTEVVNIDKENQDSCSFGLKERKELSRFHQASFLPSSEKISPSMVGNSVSSSRILKLTRSRSCAASLMKDSSSDWFDQEEIIQNTPPIGIHKDQIRRPEGYDRRTYTLNYNPNADRLSWSGFGNCVRCSTVDMQSVKPSFDMEIDDGDLSPVRREKKECESSKPPPYRKVSGTGVESTVSAKKFKDAGSNTLQSNEEKHFEWSSEFRRLQKEIIERWHSCNVSLVHRTYFFLLFKGDSSDSIYMEVELRRLSYLKENQILEDGRTLTPESSKRYLRRERQMLSRQMERKLSKSEREKMYFKWGISISSKHRRLQLAHRLWSETDIDHVRESATIVAKLVGTVEPDQAFKEMFGLNFAPRRTRKKTFGWTSSVKHIL* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2271 894 PRINTS Kinesin heavy chain signature 91 108 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 PRINTS Kinesin heavy chain signature 127 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 PRINTS Kinesin heavy chain signature 177 198 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 PANTHER CENTROMERE PROTEIN E 1 483 - -
Psa4g2271 894 PANTHER CENTROMERE PROTEIN E 514 894 - -
Psa4g2271 894 MobiDBLite consensus disorder prediction 399 413 - -
Psa4g2271 894 ProSitePatterns Kinesin motor domain signature. 126 137 IPR019821 GO:0003777|GO:0005524|GO:0007018
Psa4g2271 894 SMART kinesin_4 1 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 MobiDBLite consensus disorder prediction 671 692 - -
Psa4g2271 894 Pfam Domain of unknown function (DUF3490) 723 876 IPR021881 -
Psa4g2271 894 Gene3D Kinesin motor domain 1 257 IPR036961 -
Psa4g2271 894 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 260 IPR027417 -
Psa4g2271 894 Coils Coil 890 894 - -
Psa4g2271 894 Pfam Kinesin motor domain 2 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 MobiDBLite consensus disorder prediction 395 415 - -
Psa4g2271 894 MobiDBLite consensus disorder prediction 431 461 - -
Psa4g2271 894 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 514 894 - -
Psa4g2271 894 PANTHER ATP-BINDING MICROTUBULE MOTOR FAMILY PROTEIN 1 483 - -
Psa4g2271 894 Coils Coil 273 293 - -
Psa4g2271 894 MobiDBLite consensus disorder prediction 429 461 - -
Psa4g2271 894 ProSiteProfiles Kinesin motor domain profile. 1 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2271 894 Coils Coil 236 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2271 Psa-Chr4 184841908 184848788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2271 3 257 Miscellaneous Gene Families AT2G21380 46.275 1.21e-58 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2271 K11498 - gmx:100775190 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3226 7 241760101 241767680 Psa4g2271 4 184841908 184848788 PCT