Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3223 ATGGCTGAGAGAGAAGCAACAATAGCTCCAAAATCTCTTGAGGATTTTGATCCTCAAAAGAAACCCAAAAAGAACAAATTTGCTTGCGGTTATGCTATCTTGGCTTCTATGACTCCTATATTACTTGGCTACGATATTGGTGTGATGAGTGGAGCAGCTATCTATATCAAAAGAGACCTTAAAGTAACCGACGTACAGATTGAAATTCTCTTAGGCATCATAAACCTTTACGCTCCCATAGGTTCTTATATTGCAGGGAGATTCTCTGACTGGTTTGGTCGGCGTTACACGATTGTCCTCGCCGGTGTAATTGCCTTCACCGGAGCTATTCTTATGGGACTTTCTCCAAACTATGCATTTCTCATGTTTGGTCGTTTCTTCGCTGGTGTTGCCGTAGGTTTCTTCTTCATTGCTTCTGTTTATATCTCTGAAGTGTCACCCAGTTACTCTCGAGGATTCCTCACTTCTTTACCTGAGGTATTTGTGAATGCAGGGATTTTAATAGGATACATCTCAAACCTTGGATTTTCGAAGCTGCCTTTACGTTATGGTTGGCGAGTAATGCTTGGAATCGGCGTCATCCCATCTATATTTCTAGCTGTAGCCGTATTAGCCATGCCGGAGTCACCTAGGTGGCTTGTTTCTAAGGGTCGAATAGGGGAAGCCAAAAAAGTTCTCCAAAAAATTTCTGATTCTAAAGAAGAGGCTCAACAAAGACTAACTGATATTAAAGAGATAATAGGGATTCCCTCTGATTGCGATGACGACATTGTTTCAGTCACAAAAGTTCAAGGCAAAGGTGTATGGAAAGAAATATTTATTTATCCTACACCCGCGGTTCGTCACATCTTTATAGCCTCAATTGGGATTCAGTTCTTCCAACAAGCTACTGGTATAGACGCTGTCGTTTTATACAGTCCTGAAATCTTCGAGAAGGCTGGGATCACGTCAGACATAAATAAACTTCTTGCAACCATAGCAGTTGGATTTGTGAAAACAGTGTTTATCTTAGTAGCCACTTTTTTCTTGGACCGTGTTGGGAGGCGTATGTTATTGTTAACCAGTGTTGGTGGGTTAATAATCTCACTTCTTACGTTGGCAGTTAGTCTTACTATTATTGAAAACTCACGCACCAAACTAACATGGGCTATATGGCTTAGTATAGCGACAGTTTTATCCTACGCAGCAACATTCTCAATTGGGATGGGTCCAATCACGTGGGTTTATTGCTCTGAGATATTTCCGTTGAGGCTTCGATCTCAAGGCGTGTCTATTGGGGCCGTGGTGAATAGGATCACTAGTGGAGTCATCGCTATGACCTTTTTGTCCCTTATGAAGGCCATCACTATTGGTGGTGTTTTCTTTCTCTTTGCAGGAATTGCTATTCTCGCGTGGGTCTTTTATTATATTATGCTTCCAGAAACACAAGGAAAAACTCTAGAGGAAATAGAAGGGTCTTTTGGTAATTTTTGGAGGAAGTCGAATACTAGTCTCACTACTGAAGAAGTGAGAAACTAA 1518 0.413 MAEREATIAPKSLEDFDPQKKPKKNKFACGYAILASMTPILLGYDIGVMSGAAIYIKRDLKVTDVQIEILLGIINLYAPIGSYIAGRFSDWFGRRYTIVLAGVIAFTGAILMGLSPNYAFLMFGRFFAGVAVGFFFIASVYISEVSPSYSRGFLTSLPEVFVNAGILIGYISNLGFSKLPLRYGWRVMLGIGVIPSIFLAVAVLAMPESPRWLVSKGRIGEAKKVLQKISDSKEEAQQRLTDIKEIIGIPSDCDDDIVSVTKVQGKGVWKEIFIYPTPAVRHIFIASIGIQFFQQATGIDAVVLYSPEIFEKAGITSDINKLLATIAVGFVKTVFILVATFFLDRVGRRMLLLTSVGGLIISLLTLAVSLTIIENSRTKLTWAIWLSIATVLSYAATFSIGMGPITWVYCSEIFPLRLRSQGVSIGAVVNRITSGVIAMTFLSLMKAITIGGVFFLFAGIAILAWVFYYIMLPETQGKTLEEIEGSFGNFWRKSNTSLTTEEVRN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3223 505 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 502 - -
Psa7g3223 505 SUPERFAMILY MFS general substrate transporter 17 484 IPR036259 -
Psa7g3223 505 Coils Coil 219 246 - -
Psa7g3223 505 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 502 IPR045262 GO:0015144
Psa7g3223 505 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa7g3223 505 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 476 IPR020846 GO:0022857
Psa7g3223 505 Gene3D MFS general substrate transporter like domains 22 489 IPR036259 -
Psa7g3223 505 TIGRFAM SP: MFS transporter, sugar porter (SP) family 18 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g3223 505 Pfam Sugar (and other) transporter 32 485 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3223 Psa-Chr7 240619431 240636286 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3223 14 496 Organic Solute Cotransporters AT3G18830 65.914 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3223 - - gmx:100816478 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3223 7 240619431 240636286 Psa7g3223 7 240619431 240636286 ECH
Psa7g3223 7 240619431 240636286 Psa2g3657 2 393271209 393275283 ECH