Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3657 ATGGCTGGTGCACTCTTATTCATCAAGGAAGAACTTGGAATCACTGACATGCAAGTGCAACTTCTAGCAGGAATCTTAAATGTGTGTGCATTACCAGCATGCATGGTAGCTGGAAGAACATCCGATTACATAGGTCGACGATACACCATCATTTTATCCGCGATAATCTTCTTCTTAGGCTCAATCTTAATGGGGTATGGACCAAATTTTCCAATCTTGATGATTGGAAGATGCATTGCAGGATTTGGTGTAGGGTTTGCACTTATTATAACACCGGTTTATAGCGCAGAAATTTCATCTCCTTCTTATAGAGGCTTTCTAACTTCTCTCCCAGACGTTTCCATCAACGCAGGTTTCTTATTTGGTTATGTCTCAAATTTTTTCCTTGGAAAATTGTCTTTAAGACTTGGATGGAGAATAATGCTAGCTATTCCTGCAATTCCTTCACTTGGATTGATAATTCTGATGTTAAAATTGGTAGAATCTCCGAGATGGTTAGTATTGCAAGGACGTTTAGATGATGCTAGAAAAGTTCTTTTACTAATATCCAATTCCAAAGAAGAAGCTGAACAAAGGTTAAAGGAAATAAAAGTTGCCGTTGGAATCGATGAAAATTGCATGCAAAGCATTGTTCATGTTCCACAGAAAACGCGTAACGGTGGAGGAGCTTTAAAGGAAATGTTTCATAAACCTTCACCGCATGTTTATAAGATACTATTTGCAGCTATTGGTGTTCATGTGTTCCAACAAATATGTGGAATTGAAGGTATTTTGTTATATAGTCCAAGAGTTTTTGAAAGAGTAGGAATCACGGAAAAAAGTACACTTCTTTTAGCGACGGTTGGTATCGGAATAAGCCAAACTTTATTCACATTGTTATCAAGTTTTTTGTTGGATAGAATTGGGAGAAGGACACTATTGTTGGTTAGTTCTGGAGGTGTGGTTGTGACTTGGTTAGGGTTGAGTATTTCTTCAGCTATAGTTGAAAGTTCTAAACTAGGAGAAGAACCATTATGGGCCATAGTTTTTATTATTGTTGTTATGTATATTTTGGTGGCTTTTGTTGCAATTGGAATTGGACCTGTGACATGGGTTTATAGCTCTGAGATATTTCCACTAAGGTTGAGAGCACAAGGTTTAGGGGTTTGTGTGGCTGTGAATAGAGTTACAAATGTGGCAGTGGTTACAAGTTTTATTTCAATTTATAAGACAATAACATTAGGTGGAACTTTCTTTATGCTTGTGGGGATTAATGCTTTGGCTTGGTGGTTTTACTATTCTTTCTTGCCTGAAACTAAAGGAAGATCATTAGAAGATATGGAGACTATCTTTGGGAAAGATTCTAAGAGTGAGGTGCAATTGAAGTTTGAAAGCAACAATGCATAG 1386 0.3716 MAGALLFIKEELGITDMQVQLLAGILNVCALPACMVAGRTSDYIGRRYTIILSAIIFFLGSILMGYGPNFPILMIGRCIAGFGVGFALIITPVYSAEISSPSYRGFLTSLPDVSINAGFLFGYVSNFFLGKLSLRLGWRIMLAIPAIPSLGLIILMLKLVESPRWLVLQGRLDDARKVLLLISNSKEEAEQRLKEIKVAVGIDENCMQSIVHVPQKTRNGGGALKEMFHKPSPHVYKILFAAIGVHVFQQICGIEGILLYSPRVFERVGITEKSTLLLATVGIGISQTLFTLLSSFLLDRIGRRTLLLVSSGGVVVTWLGLSISSAIVESSKLGEEPLWAIVFIIVVMYILVAFVAIGIGPVTWVYSSEIFPLRLRAQGLGVCVAVNRVTNVAVVTSFISIYKTITLGGTFFMLVGINALAWWFYYSFLPETKGRSLEDMETIFGKDSKSEVQLKFESNNA* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3657 461 PRINTS Sugar transporter signature 74 93 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa2g3657 461 PRINTS Sugar transporter signature 249 259 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa2g3657 461 PRINTS Sugar transporter signature 345 366 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa2g3657 461 PRINTS Sugar transporter signature 368 380 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa2g3657 461 ProSitePatterns Sugar transport proteins signature 2. 79 104 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa2g3657 461 ProSitePatterns Sugar transport proteins signature 1. 37 54 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa2g3657 461 ProSitePatterns Sugar transport proteins signature 1. 294 311 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa2g3657 461 Coils Coil 172 192 - -
Psa2g3657 461 Gene3D MFS general substrate transporter like domains 4 448 IPR036259 -
Psa2g3657 461 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 1 449 - -
Psa2g3657 461 SUPERFAMILY MFS general substrate transporter 2 441 IPR036259 -
Psa2g3657 461 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 433 IPR020846 GO:0022857
Psa2g3657 461 TIGRFAM SP: MFS transporter, sugar porter (SP) family 15 439 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa2g3657 461 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 449 IPR045262 GO:0015144
Psa2g3657 461 Pfam Sugar (and other) transporter 15 444 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3657 Psa-Chr2 393271209 393275283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3657 1 444 Organic Solute Cotransporters AT2G18480 54.279 1.14e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3657 - - gmx:100786322 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3657 2 393271209 393275283 Psa2g3657 2 393271209 393275283 ECH
Psa7g3223 7 240619431 240636286 Psa2g3657 2 393271209 393275283 ECH