LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g3139	ATGTCAGTTTCAGCAACATCATCACTAGTTGCTCCTCCAACCACTAATAATTTATCTAGACGTTCCGCAAATTATCATCCCAACATTTGGGGGAGTCATTTTATTCAATATCTATTGGAACCTATGGAATTGGATGAAATAATGAAGCAGATTATACTGCTAAAAGAAAACGTGAGGCAGATGCTACTCCCTACAAACCCTTTGAATGATGCTAATTTGATCGATTCAATCCAACGTTTGGGGTTATACCATCATTTTGAGCATGAGATCGGAGAATTATTGCAACATATTCACAATAATTATGTTCAAAATGGAACAATAATTCTCAATTTTAACGAAGATCTTCATTCTATTGCACTTGTCTTTAGGTTACTAAGACAACATGGATATCCCATATTGCCGGATGTTTTTGAAAAGTTCAAGAACGAGCAAGGAAACTTCAATGAAACACTTGTTGGTGATGTTGAGGGAATGTTAAGTTTCTTAAGAGGCCACTCTTCCAAAAACATGCCTAGATTAGTGGCAAGGAATTATATTTCTACTTATGAAGAAGATCCCTCACATGATTGCAACTTTGCTATTACTTGCCAAAATAAGATTTCAATCTGCTACAAAAAACAGCATCAGAAAGAAACTGGTGATATTTCAAAATGGTGGAAGGATTTGGATTTTGAAACAAAACTGCCATTTGCACGCAATAGAATAGTTGAAGCATACTTTTGGATATTGGGAGTATATTTTGAGTCTCAATACTCTGTCGGTAGAAAGATAATGACCAAGGTGATATCCATGACGTCAGTAATTGATGATATATATGATAACTATGGTACAATAGATGAGCTACAACTTTTCACTCAAGCAATTCAAAGGTTTGAGGTGGGATATGAGTTGCATGGATTTTCTACCAGAATACATGAAATTTTGCTACAAAGCCCTTTTGATGTTATGAAAGAAATGGAGCAAGAGATGATGAAAAGATTGGTACATGCCTACTTGACTGAGGCCAAATGGTTCAGTTGTAATTTTATACCAACAATGGAAGAATACATGGCTCTAGGAATAGTAACTTCTGGTTACTATCTACTCACAGCAACATCCTTCATTGGAATGGGATGCATTGCTACTGAAGAAGCTTTCCAATGGTTAACCAATAACCCCAAAATTGTTAATGCTTCAACAAGAATTACCAGACTCATGGATGATATTGTTTCCAATGAGTTTGAGCAGAAGAGAGGGCATGGTGCCTCTTCTATAGAGTGCTACATGAATGAACATGGTGTAACTAGATCAGATGCCATTGAAGAACTCTCGAGACAGGTTACAAATGCTTGGAAGGATATCAATGAGGAACTTCTTGATTCAACTGAAGTGCCAAAGCCTCTCCTTATGCGAGTTCTCAATTTATCACGTGTCCTTCATGTGCTTTATAAAGATGAAGATTGCTACACTAACTCCCAAGGATCAACAAAGAATGACATAATATCTACCTTGTTGAATCCATGTCCAATATGA	1512	0.3644	MSVSATSSLVAPPTTNNLSRRSANYHPNIWGSHFIQYLLEPMELDEIMKQIILLKENVRQMLLPTNPLNDANLIDSIQRLGLYHHFEHEIGELLQHIHNNYVQNGTIILNFNEDLHSIALVFRLLRQHGYPILPDVFEKFKNEQGNFNETLVGDVEGMLSFLRGHSSKNMPRLVARNYISTYEEDPSHDCNFAITCQNKISICYKKQHQKETGDISKWWKDLDFETKLPFARNRIVEAYFWILGVYFESQYSVGRKIMTKVISMTSVIDDIYDNYGTIDELQLFTQAIQRFEVGYELHGFSTRIHEILLQSPFDVMKEMEQEMMKRLVHAYLTEAKWFSCNFIPTMEEYMALGIVTSGYYLLTATSFIGMGCIATEEAFQWLTNNPKIVNASTRITRLMDDIVSNEFEQKRGHGASSIECYMNEHGVTRSDAIEELSRQVTNAWKDINEELLDSTEVPKPLLMRVLNLSRVLHVLYKDEDCYTNSQGSTKNDIISTLLNPCPI*	504

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g3139	503	Pfam	Terpene synthase family, metal binding domain	205	446	IPR005630	GO:0000287\|GO:0010333\|GO:0016829
	Psa7g3139	503	Gene3D	-	65	162	IPR036965	GO:0010333\|GO:0016829
	Psa7g3139	503	SFLD	Isoprenoid Synthase Type I	206	501	-	-
	Psa7g3139	503	SUPERFAMILY	Terpenoid cyclases/Protein prenyltransferases	26	188	IPR008930	-
	Psa7g3139	503	Gene3D	Farnesyl Diphosphate Synthase	27	64	IPR008949	-
	Psa7g3139	503	PANTHER	OS04G0344100 PROTEIN-RELATED	19	161	-	-
	Psa7g3139	503	PANTHER	OS04G0344100 PROTEIN-RELATED	167	487	-	-
	Psa7g3139	503	CDD	Terpene_cyclase_plant_C1	20	500	IPR044814	GO:0010333\|GO:0016102
	Psa7g3139	503	PANTHER	TERPENE SYNTHASE 2-RELATED	19	161	-	-
	Psa7g3139	503	PANTHER	TERPENE SYNTHASE 2-RELATED	167	487	-	-
	Psa7g3139	503	Pfam	Terpene synthase, N-terminal domain	29	161	IPR001906	GO:0010333\|GO:0016829
	Psa7g3139	503	Gene3D	Farnesyl Diphosphate Synthase	164	501	IPR008949	-
	Psa7g3139	503	SFLD	Terpene Cyclase Like 1 C Terminal Domain	206	501	IPR034741	-
	Psa7g3139	503	SUPERFAMILY	Terpenoid synthases	206	503	IPR008949	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g3139	Psa-Chr7	229841149	229843776	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g3139	K15803		-	aprc:113865764	578.17

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa5g5719	5	497741288	497743691	Psa7g3139	7	229841149	229843776	PCT