Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g5719 ATGTCTCATGCAGTACCTGAAATCACACGACCTTGTGTGAACTTTCGTCCTAGCATTTGGGGAGATGTTTTCCTTCAATATGATTCTGAGTTACTGGAAATCAATGACAATATGAAGAAACAAGCACAGATACAAAAAGAGGAAGTGAATGAATTTTTTCAATCTTCAAGCAATAATAATATCTCACAAAAACTAAACATCATTGACTCATTGCAACGTTTGGGAATATCTTATCACTTCGAAACTGAAATTGACGAAGCATTAGAACAAATCCACAATAGTTTAATTATCAATAAAGAAATAAGCACAAAAGAAGAAGATGACGTTCACTTTCTGGCATTAGCATTTCGCTTGCTTAGGCAAAAAGGACATCACATTTCATCAGATATATTTAAAATTTTCAAAAACAATAAAGGGAGCTTCAATGAAAAGGTTGATAAACATGTTCAAGGAATGTGGAGCTTGTATGAAGCAGCGCATTTAAAGATTCGCGGAGAAGATATATTAGATGAAGCACTTGATTTCACACAAGCTTACATGAATTCCAAAACTACTATCAATCAATTGAGTAGTTTTCTTCATGCACAAGTAACTCAATGTTTAAGGAAACCTCTGCATAAGGGAGTTCCTAGATTGGAGACAAGGTGTTACATATCTTCCTATGAACAAGATCCTTCGCATAGTAAAGTTCTTTTAAACTTTGCAAAGTTAGATTTCAACATGCTACAGAAAATGCATCAAAAAGAACTTGCCAGCATCACCATGTGGTGGAAAAAATCGGACTTTACGACGAAAGTCCCTTACGCAAGGGATCGAGTAGTCGAGGCATACTTTTGGCCATTGGCTATGTCCTATGAGCCTAATTACGCTACTTCAAGAAAGATAGGAGGAAAATTGGTGTCATGCATTTCTCTTTTAGATGATACTTATGATGCATTCGGCACGGTTGAAGAACTCGAAATCTTCACAGAGGCAATCCAAAGGTGGGATTTTAATCTCATTCAATCACTTCCAGAGTGCATGAAAGTGGTATTCAAAACAGTTGTAGGACTATGGGATGAAATTGAGATGGTATTGGTAGAGAATGGAAAATCAAATTTCGTGCTGCCATATATTAAACATGCCTTTTATAACCTGGCACAATCCTACTTGGTTGAAACAAAATGGGGCAATGAAGGATTCATACCAACATACGACGAATACAAGGCGAACGGACTTATATCTTCTACGATCCCTCTTTCACTAATATCTTTCATTGGTCTTGGAGAATCTTCAAACAAAGAGTTGCTTGATTGGATTTCCAGTGATCCAACAATCATCAATGCTGTAGCGGCTATTGGCAGGCTCGCGGACGACGTGTCCTCGCATAAGTTTGAGCAGCAAAGAGTGCATGTTGCTTCAGCAGTTGAATGTTGCATGAAGCAATATGAAGTGTCACAAGAAGAGGCCTATAAAATCATTCACAAGGATATTGAAGATTTTTGGATGGATATAAATGAAGAGTGCCTCATGTTAAGGAGTATCCCAAGGTCTGTGCTTGATTGTATTGTTAATGTGGCAAGAGTAACTGAGTTCACCTATGAAAACTATGAGGATAAATACACAAATGGGGAACTGTTGAAAGATTATGTTGTTCAGCTGCTCATAGATCCAATAACCATCGAGCAAAACGAGTAG 1677 0.3745 MSHAVPEITRPCVNFRPSIWGDVFLQYDSELLEINDNMKKQAQIQKEEVNEFFQSSSNNNISQKLNIIDSLQRLGISYHFETEIDEALEQIHNSLIINKEISTKEEDDVHFLALAFRLLRQKGHHISSDIFKIFKNNKGSFNEKVDKHVQGMWSLYEAAHLKIRGEDILDEALDFTQAYMNSKTTINQLSSFLHAQVTQCLRKPLHKGVPRLETRCYISSYEQDPSHSKVLLNFAKLDFNMLQKMHQKELASITMWWKKSDFTTKVPYARDRVVEAYFWPLAMSYEPNYATSRKIGGKLVSCISLLDDTYDAFGTVEELEIFTEAIQRWDFNLIQSLPECMKVVFKTVVGLWDEIEMVLVENGKSNFVLPYIKHAFYNLAQSYLVETKWGNEGFIPTYDEYKANGLISSTIPLSLISFIGLGESSNKELLDWISSDPTIINAVAAIGRLADDVSSHKFEQQRVHVASAVECCMKQYEVSQEEAYKIIHKDIEDFWMDINEECLMLRSIPRSVLDCIVNVARVTEFTYENYEDKYTNGELLKDYVVQLLIDPITIEQNE* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g5719 558 Pfam Terpene synthase family, metal binding domain 232 496 IPR005630 GO:0000287|GO:0010333|GO:0016829
Psa5g5719 558 SUPERFAMILY Terpenoid synthases 227 554 IPR008949 -
Psa5g5719 558 Gene3D Farnesyl Diphosphate Synthase 17 538 IPR008949 -
Psa5g5719 558 CDD Terpene_cyclase_plant_C1 10 551 IPR044814 GO:0010333|GO:0016102
Psa5g5719 558 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 2 551 - -
Psa5g5719 558 SFLD Isoprenoid Synthase Type I 229 553 - -
Psa5g5719 558 PANTHER OS04G0344100 PROTEIN-RELATED 2 551 - -
Psa5g5719 558 Gene3D - 59 227 IPR036965 GO:0010333|GO:0016829
Psa5g5719 558 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 17 227 IPR008930 -
Psa5g5719 558 Pfam Terpene synthase, N-terminal domain 19 201 IPR001906 GO:0010333|GO:0016829
Psa5g5719 558 SFLD Terpene Cyclase Like 1 C Terminal Domain 229 553 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g5719 Psa-Chr5 497741288 497743691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g5719 K15803 K14183 gmx:100781367 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5719 5 497741288 497743691 Psa5g5719 5 497741288 497743691 ECH
Psa5g5719 5 497741288 497743691 Psa7g3139 7 229841149 229843776 PCT