Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g2406 ATGGCTGTGGAATATCATTGTTGCGAACCGGGATTCTTCATCCACATACTCATAATCGTACTGTTGGTGGTGTTCGCCGGATTAATGTCCGGCCTCACCTTGGGACTCATGTCTTTAAGTCTCGTTGATCTTGAAGTTCTAGCTAAGTCCGGTACTCCTCGCGATCGTAAACATGCCGAGAAGATATTGCCTGTTGTGAGAAATCAGCATTTGTTGCTTTGTACTTTGCTGATTTGCAATGCTGCCGCCATGGAGGCACTTCCAATTTTTCTTGATAGTCTTGTTACTGCTTGGGGTGCTATCCTTATTTCGGTCACGTTGATTCTTCTCTTTGGTGAGATTATACCCCAATCAGTTTGTTCTCGATATGGTTTAGCTATTGGTGCATCAGTGACTCCCTTTGTTCGTGTGCTTGTATGGATATGTTACCCAGTTTCTTTTCCAATTAGCAAGTTGTTGGACTATTTGCTGGGTCATCGACACGAAGCTCTTTTCCGCAGAGCTGAGTTGAAAACGCTCGTAGATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTTACTCATGATGAAACAACAATAATTGCTGGGGCGCTTGAACTTAGTGAGAAAACAGCCAGTGATGCCATGACTCCTATATCTGAAATATTTGCCATTGATATTAATTCGAAGCTTGATAGGGGGCTGATGAACGAAATATTGGGCAAAGGGCATAGCAGAGTCCCAGTCTATTATGAGCAGTCCACAAACATTATTGGACTTATACTGATCAAGAATTTATTGACAATTCATCCGGAAGATGAAGAACCTGTGAAGAATGTAACGATACGCAGGATTCCAAGGGTTCCAGAAAGTATACCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCATAGTCACATGGCCGTTGTTGTAAGACAGTGTGACAAGAAGAAGCAACCATCTTCCCAAAATAATGCAAATGATTCGGTGAGAGAAGTGAAGGTGGATATTGATGGTGAAAAGCCTCCCCAAGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTTTCCACATTCAAACAGGTCAAATAGGGGCAATTCTCGGGGCAGAAAATGGACAAAAAATATGTACTCAGATATTTTAGAGATAGATGGTAGTCCCCTTCCAAATATCCCTGAAGAAGAAGAAGCTGTTGGAATAATTACAATGGAAGATGTCATTGAAGAACTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATGA 1278 0.4171 MAVEYHCCEPGFFIHILIIVLLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPRDRKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVSFPISKLLDYLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISEIFAIDINSKLDRGLMNEILGKGHSRVPVYYEQSTNIIGLILIKNLLTIHPEDEEPVKNVTIRRIPRVPESIPLYDILNEFQKGHSHMAVVVRQCDKKKQPSSQNNANDSVREVKVDIDGEKPPQEKVLKPKIPIQKWKSFPHSNRSNRGNSRGRKWTKNMYSDILEIDGSPLPNIPEEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g2406 425 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 425 IPR045095 GO:0010960
Psa7g2406 425 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Psa7g2406 425 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Psa7g2406 425 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Psa7g2406 425 SUPERFAMILY CBS-domain pair 194 411 IPR046342 -
Psa7g2406 425 Gene3D - 191 325 IPR046342 -
Psa7g2406 425 Gene3D - 381 417 IPR046342 -
Psa7g2406 425 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g2406 Psa-Chr7 170385842 170392261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g2406 K16302 - gmx:100801937 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g2406 7 170385842 170392261 Psa7g2406 7 170385842 170392261 ECH
Psa7g2406 7 170385842 170392261 Psa1g4852 1 362089965 362094392 PCT