Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g4852 ATGCTGCTGCCATGGAGTCTTGTTGTTGCTTGGGGAGCTATCTTAATTTCTGTGACACTAATTCTTCTATTTGGTGAGATTATTCCTCAATCGGTTTGTTCTCGATATGGTTTAACAATCGGTGCAACAGTAGCGCCAATTGTTCGTGTTCTTGTATGGATATGTTTTCCAGTTGCTTATCCAATAAGCAAGTTGTTGGATTTTTTGCTCGGCCATCGCCATGAAGCTCTTTTCCGCAGAGCTGAGCTGAAAACACTTGTAAATTTACATGGTAACGAGGCTGGAAAAGGTGGTGAACTAACACATGATGAAACAACTATCATTGCTGGAGCACTTGAACTCTCTGAGAAAACTGCTGGTGATGCTATGAGTCCTATAAATGAAATATTTTCTATTGATATTAATTCAAAACTTGATAGAGATTTGATGAATGTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTTTATTATGAAGAGCCTACAAATATCATTGGACTTATTTTGATCAAGAATTTGTTAACTATTGATCCAGAAGAGGAAGTACCTGTGAAAAGTGTGACCATACGAAAAATACCAAGGGTTCCAGAAATGATGCCACTGTATGATATATTGAATGAATTCCAGAAGGGACATAGCCACATGGCTGTTGTTGTGAGAAATTTTGACAAGACAGGGCAACAATCTTCCAACAATAATTGCAATGATTTAGTGAGAGATGTGAAAGTGAATATTGATGTGGAAAAGACTCCTCAAGAGAAAATGTTGAAAAACAAGATGCAACTTCATAAGAGAAAAAGCTTACCAAATGCAAGTAATTCAAATAGGAGTACTGGTTCATCTAGGAGCAAAAAATGGTCACAAAATATTTACTCAGATATTTTGGAAATTGATGGAAATTCAATTCCAAAGCTACCTGAAAAAGAAGAAGCTGTTGGAATTATTACAATGGAAGATGTAATTGAAGAGCTTTTGCAGGAGGAGATCTTTGATGAGACAGATCATCATTTTGAAGAGTCATAA 1023 0.3646 MLLPWSLVVAWGAILISVTLILLFGEIIPQSVCSRYGLTIGATVAPIVRVLVWICFPVAYPISKLLDFLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTAGDAMSPINEIFSIDINSKLDRDLMNVILEKGHSRVPVYYEEPTNIIGLILIKNLLTIDPEEEVPVKSVTIRKIPRVPEMMPLYDILNEFQKGHSHMAVVVRNFDKTGQQSSNNNCNDLVRDVKVNIDVEKTPQEKMLKNKMQLHKRKSLPNASNSNRSTGSSRSKKWSQNIYSDILEIDGNSIPKLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEES* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g4852 340 ProSiteProfiles CNNM transmembrane domain profile. 1 104 IPR002550 -
Psa1g4852 340 Pfam Cyclin M transmembrane N-terminal domain 10 103 IPR002550 -
Psa1g4852 340 ProSiteProfiles CBS domain profile. 123 184 IPR000644 -
Psa1g4852 340 SUPERFAMILY CBS-domain pair 107 326 IPR046342 -
Psa1g4852 340 MobiDBLite consensus disorder prediction 265 285 - -
Psa1g4852 340 Gene3D - 281 332 IPR046342 -
Psa1g4852 340 MobiDBLite consensus disorder prediction 252 285 - -
Psa1g4852 340 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 6 340 IPR045095 GO:0010960
Psa1g4852 340 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 6 340 - -
Psa1g4852 340 CDD CBS_pair_CorC_HlyC_assoc 118 219 IPR044751 -
Psa1g4852 340 Gene3D - 104 240 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g4852 Psa-Chr1 362089965 362094392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g4852 K16302 - gmx:100795897 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g4852 1 362089965 362094392 Psa1g4852 1 362089965 362094392 ECH
Psa7g2406 7 170385842 170392261 Psa1g4852 1 362089965 362094392 PCT