Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1834 ATGGCACCTTCTTTTTCTTCTTCTTCCTTTCCTCTTCGTTGGGAGAGCACAGGAGATCAATGGTGGTATGCAACACCTATTGATTTAGCAGCTGCAAATGGTCTCTATGATTTAGTCCTTGAGCTTCTTCATCTTGATACAAATCTTCTCATTAAACTCACTTCTCTTCGTCGAATTCGCCGACTCGAGACTGTGTGGGATGATGAATCTCAGTTTGAAGATGTTGCCAAGTGCAGGTCTTATGTTGCAAGGAAGCTTATGGTTGAGTGTGAGAAAACAGCAAGAGGAGAGAATTCTCTGGTTGGTAGTGGATATGGTGGTTGGCTTTTGTACACTGCTGCTTCTGCTGGTGATTTGGAGTTTGTTCGTGAATTGTTGAGAAGAGATTCTTTGTTGGTTTTTGGTGAAGGAGAGTATGGTGTTACTGATATGTTTTATGCTGCTGCTAGGAGTAAGAATTCTGAGGTGTTTAACATGATTCTTGATTTTGCGCTTCTAGGAAAAGATTGTGGTGGTGTTGAATTGGATGAAGGTGGTGGTGGAGTTTTCAAGAGGGAGATAGTGAATAGGGCTATTCATGCTGCTGCTAGAGGAGGAAATTGGGAAATACTGAAGAAGGAGCTTATTTTAGGAAGTGCTTTTCAGATTTTAGCTTATAGAGATGCTCAAGGATGTACTGTCCTGCATTCAGCTGCTGGAAGAGGACAGGTTGAGGTGGTAAGAAATCTAATTGTATTATCACCTGATATCATCGACTCAACTGATTCACAAGGCAATACAGCATTGCATGTAGCTTCTTACAGAGGTTACCTTCCTGTGGTAGAGATTCTAGTTCAAGCATCTCCTTCATTAACAAAGTTAACCAATCAAAATGGAGACACTTTTCTTCATATGGCAGTGTATGGTTTCACAAGTACTGATTTCTGCAGACTAGACAAACACACCGAACTCATGAAACGGTTATTATCAACCGAAAAGATCGCGAACATAGAAGACATAATCAATTTCAAGAACAATGTTGGAAGAACAGCGATTCACTTAGCTGTGATTCATGATGTCCAATTTGATGTAGTGGAATCAATGATGTCCGTTGCATCGATCAATCTTAATATCCGCGACGCGAATGGAATGACCCCTTTGGATTACTTGAAACAAAGACCAAGATCGAAATCTTCTGAAGTTTTAATCAAACGGTTGATTTCAGCTGGAGGAATCTCTAATTGTAAAGATTATATTACAAGAAACGCGATTGCGACTCATTTGAAAACTCGTCATGGTATTCAAGGTAGTCCTGGAACATCCTTTAGAATATCAGATTCTAAAATATTCTTATACACATGCATTGAGAACGAGAATTCATCTGATATCGCTAATACCGATCAAGCAAGTGTAGAATCAAATGCATACTCAATCGAAATAGAGGATTATTATGAGTCAGCTGCAGTTTCCCCGTCTAACAGCAAGACTAGTTCTGCCGATTCTGTTGCGAAACGTTTGAAGAATCTTCTCAAGTTCAAGGAATTCAAAGACAACGATTCTGTTAATAGTTCTCCAAGTTCAAGGAAAAACAATTCAAAAGAGTTTCCAATCTCGTTAAGGCAAAGATACTCGAAACAGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTTATTTCCATCTCCGTCTGCGAAAAAATACTTCGCCACAGGCCTAACGCAAGGTGTAATCAAGGTAAATCCACAAAAAGAAGGGTCTAATTTATCTCATTCTTCGAGCAATAAGCAAGAACACGTCGAAACAATGGGCCCGTCTTCTTGTTCCGGCCGACAAATAGATGATGGGAGTACCCTACAGTTGAACTATAATAAGGAGAGAAACTTTAACAAGAAATTGATGAACAGATATTTTTCTTTTGGAGCACAAGATCAGAGTTTGGAAGATGCTAACAGTTGTACAATGTCGAAGCACAGTTCTAAGCGTTTCGGTTTAGTTGCATAA 1989 0.3937 MAPSFSSSSFPLRWESTGDQWWYATPIDLAAANGLYDLVLELLHLDTNLLIKLTSLRRIRRLETVWDDESQFEDVAKCRSYVARKLMVECEKTARGENSLVGSGYGGWLLYTAASAGDLEFVRELLRRDSLLVFGEGEYGVTDMFYAAARSKNSEVFNMILDFALLGKDCGGVELDEGGGGVFKREIVNRAIHAAARGGNWEILKKELILGSAFQILAYRDAQGCTVLHSAAGRGQVEVVRNLIVLSPDIIDSTDSQGNTALHVASYRGYLPVVEILVQASPSLTKLTNQNGDTFLHMAVYGFTSTDFCRLDKHTELMKRLLSTEKIANIEDIINFKNNVGRTAIHLAVIHDVQFDVVESMMSVASINLNIRDANGMTPLDYLKQRPRSKSSEVLIKRLISAGGISNCKDYITRNAIATHLKTRHGIQGSPGTSFRISDSKIFLYTCIENENSSDIANTDQASVESNAYSIEIEDYYESAAVSPSNSKTSSADSVAKRLKNLLKFKEFKDNDSVNSSPSSRKNNSKEFPISLRQRYSKQCSLPNNKRTLSIRTLFPSPSAKKYFATGLTQGVIKVNPQKEGSNLSHSSSNKQEHVETMGPSSCSGRQIDDGSTLQLNYNKERNFNKKLMNRYFSFGAQDQSLEDANSCTMSKHSSKRFGLVA* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1834 662 SMART ANK_2a 291 332 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 375 408 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 105 134 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 223 252 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 257 286 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 139 170 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 340 371 IPR002110 GO:0005515
Psa7g1834 662 SMART ANK_2a 22 51 IPR002110 GO:0005515
Psa7g1834 662 Gene3D - 184 333 IPR036770 -
Psa7g1834 662 ProSiteProfiles Ankyrin repeat profile. 257 289 IPR002110 GO:0005515
Psa7g1834 662 MobiDBLite consensus disorder prediction 512 530 - -
Psa7g1834 662 Gene3D - 16 175 IPR036770 -
Psa7g1834 662 ProSiteProfiles Ankyrin repeat region circular profile. 257 279 - -
Psa7g1834 662 Gene3D - 341 399 IPR036770 -
Psa7g1834 662 SUPERFAMILY Ankyrin repeat 109 397 IPR036770 -
Psa7g1834 662 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 657 - -
Psa7g1834 662 MobiDBLite consensus disorder prediction 510 530 - -
Psa7g1834 662 Pfam Ankyrin repeats (3 copies) 192 281 IPR002110 GO:0005515
Psa7g1834 662 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 8 657 - -
Psa7g1834 662 ProSiteProfiles Ankyrin repeat profile. 223 255 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1834 Psa-Chr7 132691549 132694007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1834 110 381 Miscellaneous Gene Families AT2G31820 30.325 6.69e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1834 - - gmx:100791999 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1834 7 132691549 132694007 Psa7g1834 7 132691549 132694007 ECH
Psa5g2202 5 173485940 173488558 Psa7g1834 7 132691549 132694007 PCT