Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1794 ATGCCTGGTCTCATTGCTGGTGAGAAAAAATTTACAATGAAAAAAAAGAGTTTTTCAGATTTGGCGAATCAAGATAAGTCAATTGTTTCCAACGAGGCTCTCGATGATGATGATAATAGTTCTATTTTTGCTGGGCTATCTGATGACGTTTCGAAGTATTGTCTCGCACTCGTGCCTCGTTCGAATTTTCTAGCCATGGGCTGTGTCTCTAAAAGATGGAAGCGTTTTATTCAGAGCAAAGAGTTCATAACCGTGCGAAAACTGTCCGGGCAGCTTGAGGAATGGCTCTATATCTTGACATCAGATAGTGAAGGAAAAGGAAGTCATTGGGAGGTTATGGATTCTTTTGGTCATAACCGCCGCTCTCTTCCACCAATGCCTGGTACACGGAAGGCTGAGTTCGGCGTCGTGGTTCTTAACGGAAAACTTCTTGTTATGGCCGGCCATTCATCGATTGATGGACCTGTTTCTGTCTCGCCAGAGGTTTACCAATATAATTCTAACCTCGACAGTTGGATGAGATTGTCAAACATGAATGTGGCTCGGTACGATTTCGCCTCTGCAGAAGTCAATGGCTTGGTTTATGCAGTTGGGGGATATGGAGCAGAAGGCCACAGTCTCTCTAGCGCCGAGGTTTATGATCCGGATACTAACAAGTGGACGTTGATCGAGAGTCTTCGTCGTCCAAGATGGGGTTGTTTTGCTTGTGGATTCGAGGGGAAGCTCTATGTGATGGGCGGAAGGTCAAGTTTTACGATCGGAAACTCCAAGTCTGTCGATGTTTACGATCCCAAGAAGCAAAGCTGGTGCGAGATGAAAAAAGGGTGTGTTATGGTCACTGCTCATGCAGTACTTGAAAAGAAGTTGTTCTGTATGGAGTGGAAGAATCAAAGAAAGTTATCGATATTCAATCCTGATGATCATTCATGGAAAACCGTATCGGTGCCTCTGACGGGGAGTTCGAGTGTTGGTTTTAGATTTGGGATTCTGAATGGTAAGCTTTTGCTGTTTTCACTGAAAGAAGATCCTACTTATAGGACTTTGTTGTATGATCCGAATGCGTCGCCAGGGTCGGAGTGGGGGACTACTGATATAAAACCTTCTGGTGTGTGCTTGTGCAGTGTAACTATCAATGCCTGA 1140 0.4465 MPGLIAGEKKFTMKKKSFSDLANQDKSIVSNEALDDDDNSSIFAGLSDDVSKYCLALVPRSNFLAMGCVSKRWKRFIQSKEFITVRKLSGQLEEWLYILTSDSEGKGSHWEVMDSFGHNRRSLPPMPGTRKAEFGVVVLNGKLLVMAGHSSIDGPVSVSPEVYQYNSNLDSWMRLSNMNVARYDFASAEVNGLVYAVGGYGAEGHSLSSAEVYDPDTNKWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKSVDVYDPKKQSWCEMKKGCVMVTAHAVLEKKLFCMEWKNQRKLSIFNPDDHSWKTVSVPLTGSSSVGFRFGILNGKLLLFSLKEDPTYRTLLYDPNASPGSEWGTTDIKPSGVCLCSVTINA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1794 379 SUPERFAMILY Kelch motif 93 340 IPR015915 GO:0005515
Psa7g1794 379 Gene3D - 80 377 IPR015915 GO:0005515
Psa7g1794 379 PANTHER KELCH REPEAT F-BOX PROTEIN 1 379 - -
Psa7g1794 379 Pfam F-box domain 44 82 IPR001810 GO:0005515
Psa7g1794 379 Pfam Kelch motif 132 179 IPR006652 GO:0005515
Psa7g1794 379 Pfam Kelch motif 181 226 IPR006652 GO:0005515
Psa7g1794 379 Pfam Kelch motif 233 273 IPR006652 GO:0005515
Psa7g1794 379 PANTHER OS02G0202900 PROTEIN 1 379 IPR045887 -
Psa7g1794 379 SUPERFAMILY F-box domain 40 83 IPR036047 GO:0005515
Psa7g1794 379 SMART kelc_smart 142 192 IPR006652 GO:0005515
Psa7g1794 379 SMART kelc_smart 241 289 IPR006652 GO:0005515
Psa7g1794 379 SMART kelc_smart 193 240 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1794 Psa-Chr7 129563308 129565350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1794 43 224 Miscellaneous Gene Families AT4G33900 27.273 3.09e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1794 - - gmx:100815474 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2221 5 174112818 174114519 Psa7g1794 7 129563308 129565350 PCT