Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1778 ATGCAGGTCAACGAAAAAATGAGGAACCGTTATCCTCTTATCGGTGAAAAACGTTGGTCGGTAGTTTTGTTGGTCATTTTGGGAATAATCGGAGCATTGGTTTTCACAACAACCATACTCCAAACCTCCAACAACACCTTGTTTTGTTCACTCACCCGAACCTCGAACCAACAATCCAACCCTACACCGATCCAGCTTCGTGCCATCCTTCACTACGCAACCTCCCACGTTGTCCCTCAACAATCACTCGAAGAGATCAGCATAACCTTAAACGTCATCAAATCCCTAAACCGTCCCTTCAACTTCCTCGTATTCGGTCTCGGCCACGATTCCCTCATGTGGGCCGGGTTCAACCCACATGGAACCACGCTTTTCCTCGAAGAAGATCCGAAATGGGTTCAAACGGTTCTCAAAGACTCGCCGGAGCTTCGAGCTATTACCGTTCCCTACCGTACACAGCTTCAAGAAGCCGACGAGCTTCTCAAAACGTACCGATCTGAGCCGGCTTGTTCTCCGGCTAAAGCCACGCTGAAAGGCAACGAAAAATGTAAACTAGCGCTTCATAATCTCCCCGACGAGGTTTACGATACCGACTGGGATTTGATAATGATCGACGCGCCGAGAGGGTATTTCGCGGAGGCGCCGGGTCGTATGGCGGCGATATTTTCGATGAACGTGATGGCTAGAAATAGAAAAGGCTCCGATGTGACACACGTGTTTTTGCACGATGTAGATCGGAAGGTGGAGAAGGCTTACGCCGAAGAGTTTCTTTGTAAGAAAAACAAGGTGGATGGTGTGGGAAGACTCTGGCACTTCAAAATTCCTGCAATTGGAAACAATGACACTCGTCATGATTCCAATGATTCAACTTTCTGTTAA 879 0.4801 MQVNEKMRNRYPLIGEKRWSVVLLVILGIIGALVFTTTILQTSNNTLFCSLTRTSNQQSNPTPIQLRAILHYATSHVVPQQSLEEISITLNVIKSLNRPFNFLVFGLGHDSLMWAGFNPHGTTLFLEEDPKWVQTVLKDSPELRAITVPYRTQLQEADELLKTYRSEPACSPAKATLKGNEKCKLALHNLPDEVYDTDWDLIMIDAPRGYFAEAPGRMAAIFSMNVMARNRKGSDVTHVFLHDVDRKVEKAYAEEFLCKKNKVDGVGRLWHFKIPAIGNNDTRHDSNDSTFC* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1778 292 PANTHER OS11G0490100 PROTEIN 7 281 IPR006514 GO:0045492
Psa7g1778 292 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 7 281 - -
Psa7g1778 292 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 67 282 IPR006514 GO:0045492
Psa7g1778 292 Pfam Polysaccharide biosynthesis 84 272 IPR021148 -
Psa7g1778 292 Gene3D Vaccinia Virus protein VP39 79 283 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1778 Psa-Chr7 128830901 128833138 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1778 - - pvu:PHAVU_002G173400g 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1778 7 128830901 128833138 Psa7g1778 7 128830901 128833138 ECH
Psa5g2259 5 176174803 176176704 Psa7g1778 7 128830901 128833138 PCT