Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2259 ATGAAGAACCGTTATCCACTCCAACAGAGAAAGCTATTCATCGGATTAGCAACCGTTGGATTAATCGGAGCAGCACTATTCATCGCCACCGCAATCACCGCCTCCGACACATCATCATTACACTGTCCAATTTCAACCGGAATCCGAACCAGATCAAACGACGACAACAACAACCCAACCCCGATCCAGCTACAATCAATACTCCACTACGCCACATCACGCGTCGTTCCTCAACAATCTGTCTCCGAGATCAAGATCAGTTTCGATGTATTGAAATCCTATAATCGTCCCTGCAACTTTCTGGTATTTGGACTCGGTCACGATTCACTCATGTGGGCCTCGTTTAATCCAGGTGGCAACACGCTCTTCCTTGAAGAAGATCCTCGATGGGTTCAAGCCGTTCTCAAAGACGCACCGGGCCTTCGGGCTCATACAGTTCGTTACCGGACACAGCTCCGGGAAGCCCACAAGCTCATCACATCTTACCGCTCCGAGCCCACTTGCTCTCCTTCTAAAACCTTCCTACGTGGCAACAAAGCTTGTAAACTCGCGCTTGAGAATTTACCGGATGAAGTTTACGATACGGAGTGGGACCTTATTATGCTAGACGCGCCTAAAGGGTACTACGCGGAGGCTCCGGGACGTATGGCCGCCGTGTTCTCCGCTGCTGTTATGGCGAGAAACAGAAAGGGATCTGGTGTGACGCATGTTTTTCTGCATGATGTGGATCGTAAGGTGGAGAAGGCTTATGCTGAAGAGTTTCTTTGTAAGAAGAACATGGTGAAGGGTGTTGGAAGGTTATGGCACTTCAAGATACCACCGTCTAACAACACTGATGCTGATCGTTTCTGTTAA 855 0.4901 MKNRYPLQQRKLFIGLATVGLIGAALFIATAITASDTSSLHCPISTGIRTRSNDDNNNPTPIQLQSILHYATSRVVPQQSVSEIKISFDVLKSYNRPCNFLVFGLGHDSLMWASFNPGGNTLFLEEDPRWVQAVLKDAPGLRAHTVRYRTQLREAHKLITSYRSEPTCSPSKTFLRGNKACKLALENLPDEVYDTEWDLIMLDAPKGYYAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKAYAEEFLCKKNMVKGVGRLWHFKIPPSNNTDADRFC* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2259 284 PANTHER OS11G0490100 PROTEIN 1 284 IPR006514 GO:0045492
Psa5g2259 284 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 284 - -
Psa5g2259 284 Pfam Polysaccharide biosynthesis 83 270 IPR021148 -
Psa5g2259 284 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 65 284 IPR006514 GO:0045492
Psa5g2259 284 Gene3D Vaccinia Virus protein VP39 75 282 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2259 Psa-Chr5 176174803 176176704 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2259 - - gmx:100791951 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2259 5 176174803 176176704 Psa5g2259 5 176174803 176176704 ECH
Psa5g2259 5 176174803 176176704 Psa7g1778 7 128830901 128833138 PCT