Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1352 ATGAAGTGTTTCACACCGTGCTTAGTCTCTTTCTGGGTTCTATTTGGTTTCTGGTTTCATAGTGTGTCATCCCGGAATCTTTCTGTGAGTGACATAAAGCAAGCTGCCTCGCCGCCGCGAGGTTGGAATTCGTATGATTCGTTTTCGTGGATAATTTCTGAACAAGAATTCTTTCAGAATGCTGAAATTGTTTCTCAGCGTCTCCGTGCTCATGGATATGAGTATGTTGTGGTGGATTACCTCTGGTATAGGAAGTTTGTAGATGGTGCTAATAGTAATTCTCTTGGATTCGACGTGATTGATCAATGGGGAAGAATGGTCCCTGATCCCGGAAGGTGGCCTTCTTCCCATGATGGGAATGGATTCTCTCAAGTAGCTAAAAAAGTACATAGCTTAGGTTTGAAGTTTGGGATTCATATTATGAGAGGGATAAGCTCACAAGCTGTGAATGCAAACACCCCTATCCTAGATCCAAATACGGGTCGTGCCTATGAAGAATCCGGTCGAGTGTGGCATGCGAAAGACATAGCGATCCCTGAAAGGGCTTGTGCGTGGATGTCTAATGGTTTCATGAGTGTAAATACAAAGTTAGGAGCAGGAAGAGCTTTTTTGAAATCGCTTTACCTACAGTATGCTGCTTGGGGTGTTGATCTTGTGAAACATGATTGTGTGTTTGGTACTGACTTGGATTTAAATGAGATAACCTATGTATCCGAGGTTCTCAGCCAACTTAATCACCCCGTTACGTATTCTCTATCTCCTGGACCCGGCGCAACACCAGCCATGGCCAAGGATATCAATGGACTAGTCAACATGTATCGCGTAACCGGAGATGACTGGGATAAATGGTTGGATGTCGAGCCTCACTTTGATGTAGCAAGGGACTTTTCTAATGCGAATTTGATAGGAGCAAATGGTTTAAAGGGAAATTCTTGGCCTGATTTGGACATGCTGCCATTCGGATGGATAACCGATCCAGGTGTGAACGAAGGTCCACACAGGTATTGTAGGTTGACTCTAAAAGAGCAAACGACGCAGATAACTTTATGGGCTATAGCAAAGTCTCCCCTTATGTATGGAGGAGATTTGCGGAAGATCGATCCTTTCACATTCAGAATCATCACGGACCCTACCCTGCTAGAGATTAATTCTTTCAGCTTAAATAATAAGGAGTATCCTTATGCTCGCGGCTTTGTGCGTTCGAAGAATGAAGATCACAAAGTAAAGAAAATTACACATTCATTAGGCCTAACTAGCTGCACTGAGTATAAGGCAAGTGGTTGGGCTGCGGAAAATCTTGAACATGATCTTCAAAGAATCTGTTGGAAAGGGGGTTTAGAAAACGAGAATCAGAAACCTTTTTGCGTAAACAAGAGACAACTTCAATTCAAATTAGACAGAGACAATACGTATCAAGAAAAATATCGCGGGAAAAATCATTTAGTTGCAACCAACGAAATGAGACTTTGCATGGATGGTTCTCCAAAACAAAAAGTTACCGCCAGTGAGTTCAAGATAGGCACATTTTCTCCTTGTACATTGGATTCAAATCAGATGTGGGAGCTAAACTCTAATGGAACCTTGGTAAATAGTTACTCCGGTCTTTGTGCAACAGTAAATTCCGTCGAAGTTAATGCTAACTCAGGCGGGATTCGCTCTTGGGTTGCGACAGGAAGAAATGGAGAATTGTATCTGGCTTTCTTCAATCTAAGTGAACAGGAGATGACGATAGAAACAACGACATCAGATTTGGATAGGTTTTTCCCCGACGGAGGCTTCCATACATGTCGAGGTACTGAAGTATGGACCGGAAAGAAAATCGTACCAAAGGAAACACAAGGGAAGATAGCAGCAGAAGTTGGAGTTCATGGATGTGCAATATTTGCTTTTACTTGCTAA 1899 0.426 MKCFTPCLVSFWVLFGFWFHSVSSRNLSVSDIKQAASPPRGWNSYDSFSWIISEQEFFQNAEIVSQRLRAHGYEYVVVDYLWYRKFVDGANSNSLGFDVIDQWGRMVPDPGRWPSSHDGNGFSQVAKKVHSLGLKFGIHIMRGISSQAVNANTPILDPNTGRAYEESGRVWHAKDIAIPERACAWMSNGFMSVNTKLGAGRAFLKSLYLQYAAWGVDLVKHDCVFGTDLDLNEITYVSEVLSQLNHPVTYSLSPGPGATPAMAKDINGLVNMYRVTGDDWDKWLDVEPHFDVARDFSNANLIGANGLKGNSWPDLDMLPFGWITDPGVNEGPHRYCRLTLKEQTTQITLWAIAKSPLMYGGDLRKIDPFTFRIITDPTLLEINSFSLNNKEYPYARGFVRSKNEDHKVKKITHSLGLTSCTEYKASGWAAENLEHDLQRICWKGGLENENQKPFCVNKRQLQFKLDRDNTYQEKYRGKNHLVATNEMRLCMDGSPKQKVTASEFKIGTFSPCTLDSNQMWELNSNGTLVNSYSGLCATVNSVEVNANSGGIRSWVATGRNGELYLAFFNLSEQEMTIETTTSDLDRFFPDGGFHTCRGTEVWTGKKIVPKETQGKIAAEVGVHGCAIFAFTC* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1352 632 CDD GH27 38 383 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 Gene3D Aldolase class I 29 386 IPR013785 -
Psa7g1352 632 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 3 630 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 SUPERFAMILY Glycosyl hydrolase domain 547 631 - -
Psa7g1352 632 SUPERFAMILY Ricin B-like lectins 485 558 IPR035992 -
Psa7g1352 632 CDD RICIN 455 545 IPR000772 -
Psa7g1352 632 Pfam Alpha galactosidase A 211 383 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 PANTHER ALPHA-GALACTOSIDASE 3 630 - -
Psa7g1352 632 Gene3D - 544 632 IPR013780 -
Psa7g1352 632 Pfam Alpha galactosidase C-terminal beta sandwich domain 549 628 IPR041233 -
Psa7g1352 632 PRINTS Glycosyl hydrolase family 27 signature 32 51 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 PRINTS Glycosyl hydrolase family 27 signature 126 147 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 PRINTS Glycosyl hydrolase family 27 signature 341 362 IPR002241 GO:0004553|GO:0005975
Psa7g1352 632 SUPERFAMILY (Trans)glycosidases 34 383 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1352 Psa-Chr7 98841033 98845232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1352 11 460 Glycoside Hydrolase AT3G26380 60.566 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1352 - - gmx:100802840 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1352 7 98841033 98845232 Psa7g1352 7 98841033 98845232 ECH
Psa7g1352 7 98841033 98845232 Psa5g2146 5 167537253 167541303 PCT