Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g2146 ATGAAGTGCTTTTCCATCTCTCTCTGCATTCTTCTTTCTCTCTTCTCTTTTCAATGTGTGTCATCTAGAAATGTATCTGAGAGTGACATACAACAAGCTACCATCCCACCAAGAGGTTGGAATTCCTATGACTCCTTTTGCTGGACAATTTCTGAACAAGAATTCTTACAAAATGCTGAAGTTGTTTCTCAGCTTCTCCATCATCATGGATATGAGTATGTTGTGGTGGATTATCTCTGGTATAGAAGAAAAGTAGAGGGTGCTTATCATGATTCTCTTGGGTTTGATGTGATTGATAAATGGGGGAGGGTGATTCCTGACCCGGGAAGGTGGCCTTCTTCGAATGACGGGAGAGGGTTTAGCCATGTGGCTAATCGAGTGCATAGCTTGGGTTTGAAGTTCGGGATTCATGTTATGAGAGGCATAAGTACACAAGCTGTCAATGCGAACACGCCTATTCTAGATACGAAAACGGGAGGTGCTTATCAAGAATCTGGTCGAGTGTGGCATGCGAAAGATATAGCAATCCGTGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTGTAAATACAAATTTGGGCGCTGGAAAAGCTTTTTTGAGGTCCCTTTATCAGCAGTATGCTGCATGGGGTGTTGATTTTGTGAAACATGACTGTGTATTTGGCGATGACTTGGATTTAAATGAAATAAGCTATGTATCAGAGGTTCTCCGGGAGCTTAATCGCCCCATTGTCTATTCATTGTCTCCTGGAACCAAAGTGACACCAGCCATGGCCAAGGATGTCAGTGGACTGGTCAATTTGTATCGTATAACAGGGGATGACTGGGATACATGGGGGGATGTCAAAGCTCATTTTGATGTATCAAGAGATTTTGCAGCTGCGCATATGATAGGGGCAAAAAGTTTAATGGGGAACTCATGGCCGGATTTGGACATGCTTCCATTTGGATGGCTAACTGATCCTGATAGTTGTTGGACTTCAAATACAGGTCCACATAGGTATAGTAACCTCAACCTCGAAGAGAAGAGGACACAGATGACCTTATGGGCAATGGCAAAGTCTCCCCTTATGTATGGGGGCGATGTTCGGAAGATCGATCCCACAACATACGGTCTTATCACAAATCCTACCCTTCTGGAGATTAATTCTTTTAGCTCACATAATATGGAGTTTCCTTACATTGCAAGCTTGAAGAATGAAGATCAGGATTCTGAAAGGCAAATGAGAAGAAGCTACAGAGAAACAAAAGCATCATACACACATTCATTAGGCCTCACTAGCTGCACTGAGTCAAAGGCAAGTGGTTGGACTAGTGAGAGTATTAGCCAGTATCCTGAAAGAATCTGCTGGAAAAGGAATTTAGGAAAAAAGCATCTTGCCCCCTTCTGCATGCACAAGAGAGAACTGAACATTGCATTAGATGAAGAGAATATGTATCAAGATTATCATCATTTAGTTGCAGTGGACAGAATAAAATTTTGCTTGGATGCTTCTCCAAAACAAAACATTACTTCCAAAGAGTTCAAGCGAGGTACATTTTCGCCCTGCAGGTGGGATTCAAATCAGATGTGGCGGTTGAATCGTAATGGGACCCTGGTAAATAGCTATTCAGGCTTATGTGCCACAGTAGACCCTGTTAAAGCTACGATTAATTCTGGTGGTTTTCGCGCTTGGGCTGCAACCGGAAGAACAGGAGAAGTCTATGTTGCTTTCTTCAATCTAAGTGAACAGAAGGCGGTTATATCTTTGAAGACATCAAACCTATTTAAGGTTTTTGTTGGGAGAGACTTAAGAAGTACTTGTAAAGGCAGTGAAGTGTGGAGTGGAAGACACATTGTAATAACGCAGGGGGTGTTATCGGCGGAAGTGGAAATGCATGGAACTGCACTATTTGTTCTCAATTGTAACTAG 1920 0.426 MKCFSISLCILLSLFSFQCVSSRNVSESDIQQATIPPRGWNSYDSFCWTISEQEFLQNAEVVSQLLHHHGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDKWGRVIPDPGRWPSSNDGRGFSHVANRVHSLGLKFGIHVMRGISTQAVNANTPILDTKTGGAYQESGRVWHAKDIAIRERACAWMPHGFMSVNTNLGAGKAFLRSLYQQYAAWGVDFVKHDCVFGDDLDLNEISYVSEVLRELNRPIVYSLSPGTKVTPAMAKDVSGLVNLYRITGDDWDTWGDVKAHFDVSRDFAAAHMIGAKSLMGNSWPDLDMLPFGWLTDPDSCWTSNTGPHRYSNLNLEEKRTQMTLWAMAKSPLMYGGDVRKIDPTTYGLITNPTLLEINSFSSHNMEFPYIASLKNEDQDSERQMRRSYRETKASYTHSLGLTSCTESKASGWTSESISQYPERICWKRNLGKKHLAPFCMHKRELNIALDEENMYQDYHHLVAVDRIKFCLDASPKQNITSKEFKRGTFSPCRWDSNQMWRLNRNGTLVNSYSGLCATVDPVKATINSGGFRAWAATGRTGEVYVAFFNLSEQKAVISLKTSNLFKVFVGRDLRSTCKGSEVWSGRHIVITQGVLSAEVEMHGTALFVLNCN* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g2146 639 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 4 636 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 Pfam Alpha galactosidase A 206 385 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 PANTHER ALPHA-GALACTOSIDASE 4 636 - -
Psa5g2146 639 PRINTS Glycosyl hydrolase family 27 signature 30 49 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 PRINTS Glycosyl hydrolase family 27 signature 124 145 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 PRINTS Glycosyl hydrolase family 27 signature 343 364 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 SUPERFAMILY Ricin B-like lectins 495 555 IPR035992 -
Psa5g2146 639 SUPERFAMILY Glycosyl hydrolase domain 552 637 - -
Psa5g2146 639 Gene3D Aldolase class I 13 387 IPR013785 -
Psa5g2146 639 Gene3D - 550 638 IPR013780 -
Psa5g2146 639 CDD GH27 36 385 IPR002241 GO:0004553|GO:0005975
Psa5g2146 639 SUPERFAMILY (Trans)glycosidases 33 385 IPR017853 -
Psa5g2146 639 CDD RICIN 484 547 IPR000772 -
Psa5g2146 639 Pfam Alpha galactosidase C-terminal beta sandwich domain 556 636 IPR041233 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g2146 Psa-Chr5 167537253 167541303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g2146 2 475 Glycoside Hydrolase AT3G26380 62.552 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g2146 - - gmx:100777954 1061.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1352 7 98841033 98845232 Psa5g2146 5 167537253 167541303 PCT