Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0874 ATGGCCATGCATCGTGAAACTTTGGCTTTTGTCTTTGGCCTTCTAGGCAACATCATTTCCTTTGCAGTGTTTCTTTCACCTGTGCCAACTTTTTACATAATCTTCAAGAAAAAATCTGCTGAAGGATTTCAGTCACTTCCTTATGTTGTTGCACTTTTCAGTGCAATGCTTTGGATTTACTATGCATTTGTGAAAAGAGAAGCTGCTCTTCTTCTCATCACCATTAACACTTTTGGAATTATTGTTGAATCAGCTTATCTCATAATCTTCCTGATTTATGCCTCAAAGAAATCTAGGCTTTCTACCATAAAACTACTTCTCTTGCTGAATGTGTTCGGATTCGGAGCCATGCTTCTATCAACTCTTTACCTCGCCAAGGGAGCGAAACGTCTTTCTATTATCGGATGGATTTGTCTTGTTTTCAACATAAGTGTTTTCGCTGCACCTCTCTTCGTCATCAGCAAAGTTATAAGAACGAGGAGTGTCGAATACATGCCATTTTTCTTGTCCTTCTTCTTAACCATCAATGCTGTTATGTGGTTCTTCTATGGCCTTCTCCTCAAGGATTACTATGTTGCTCTACCAAATACACTTGGGTTTGTGTTTGGCATAATTCAGATGGTGATATATTTGATATATAGAAATGCAACACCAGTGCTTCAGGCACCATTGAAGGGTCAAGAACTGAGTGGTGGCCATATCATTGATGTTGTGAAGACTGGATCTGAACACAATCCTGCAGGTGGAGGAGGTGCGGTTAGCAAATTCTGA 771 0.3995 MAMHRETLAFVFGLLGNIISFAVFLSPVPTFYIIFKKKSAEGFQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIIVESAYLIIFLIYASKKSRLSTIKLLLLLNVFGFGAMLLSTLYLAKGAKRLSIIGWICLVFNISVFAAPLFVISKVIRTRSVEYMPFFLSFFLTINAVMWFFYGLLLKDYYVALPNTLGFVFGIIQMVIYLIYRNATPVLQAPLKGQELSGGHIIDVVKTGSEHNPAGGGGAVSKF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0874 256 Gene3D - 129 221 - -
Psa7g0874 256 PANTHER RAG1-ACTIVATING PROTEIN 1 4 246 - -
Psa7g0874 256 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 246 - -
Psa7g0874 256 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Psa7g0874 256 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Psa7g0874 256 Gene3D - 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0874 Psa-Chr7 65380687 65383159 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0874 1 239 Miscellaneous Gene Families AT5G50800 58.333 5.98e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0874 K15382 - gmx:100805676 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0874 7 65380687 65383159 Psa7g0874 7 65380687 65383159 ECH
Psa7g0874 7 65380687 65383159 Psa5g1245 5 96097830 96099571 PCT