Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1245 ATGTCCCAACACAGTCATCTATCTTTTGCCTTTGGAGTTCTAGGCAACATTTCATCTTTTGTGTGCTTTCTGGCACCACTACCAACATTCTATAGAGTTTGTAAGAAGAAATCAACAGAAGGGTTTCAATCAATCCCTTATGTGGCTGCATTATTCAGTGCAATGCTTTGGCTTTTTTATGCTTATATCAAGACAGGAGAAACTCTTCTCATCACCATCAATGCATTTGGTTGTGTGATTGAAACTATCTACCTAGCCATTTATGTCACTTACTGTCCCAAGAAAATTAGGATGTCGACATTGAGGATGATTGTGTTGATGAATTTCGTCGGATTCGGCACGATTGTCGTCTTAACTTATGTCCTAGCAAAAGAAGAAGAAGGACGTATCAAGCTTCTCGGATGGATCTGTGTAGTTTTTGCCACTAGTGTTTTTGCAGCACCTTTAAGTATTATTAGAGTTGTTATTCGCACCAAAAGTGTAGAGTTTCTTCCTTTTCCTCTTTCACTTCTTCTCCTCATAAGCGCGGTTATGTGGCTCTTGTATGGTCTTTCTCTCAGAGATATCTATGTTACCCTTCCGAACGTTGTGGGGTTAACATTTGGAATAGTTCAGATCACACTGTATGCTATATACCGAAACAGTAAGCCAGTAAATGATGAGAAGCTTCCTGAACACAAAGGAGATGTTACTAATATTACCAACAATGAAATTGAAACCGTGGTTCCAGCTTCCGATGAGAAGAAAATTGAAGTGAGTGTTGATATAGAGATCGTGGATAAAAAGGAAGAGCAGAAAGATGAACAGGATGAAGAGAAGAAACCAAAGGAGCAGGTAACTGAGGTAAAGAATGAGAAAGACAACATTGATGTTAACAAAAGTGGTTGTGAAGTCTAA 897 0.388 MSQHSHLSFAFGVLGNISSFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWLFYAYIKTGETLLITINAFGCVIETIYLAIYVTYCPKKIRMSTLRMIVLMNFVGFGTIVVLTYVLAKEEEGRIKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLISAVMWLLYGLSLRDIYVTLPNVVGLTFGIVQITLYAIYRNSKPVNDEKLPEHKGDVTNITNNEIETVVPASDEKKIEVSVDIEIVDKKEEQKDEQDEEKKPKEQVTEVKNEKDNIDVNKSGCEV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1245 298 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Psa5g1245 298 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Psa5g1245 298 MobiDBLite consensus disorder prediction 261 298 - -
Psa5g1245 298 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 7 285 - -
Psa5g1245 298 Gene3D - 10 95 - -
Psa5g1245 298 Gene3D - 128 223 - -
Psa5g1245 298 PANTHER RAG1-ACTIVATING PROTEIN 1 7 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1245 Psa-Chr5 96097830 96099571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1245 8 293 Miscellaneous Gene Families AT5G50800 51.667 4.22e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1245 K15382 - gmx:100810426 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0874 7 65380687 65383159 Psa5g1245 5 96097830 96099571 PCT