Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0828 ATGTCGAGTCACGGTGGTTCTTCGCGAAGGAGTGCTTCGTTCTCGGGTAGCCCTAGGCGGTCTAAGAAGAAGGGATCTGACTTTTCACTTCCGGACACCACTTTTCGTAAACCATTTCCGTCTATGCGCACCACCATCGCGGGTGACCGAACTGTGAAATCACTGCGGCTTTCAAAGGCATTGACAGTGCCTGAATCAACAACTATCTATGAAGCTTGCCGTCGGATGGCTGCTCGCAGGGTAGATGCCCTATTATTAACTGATTCTAGTGCTCTGCTCTGTGGAATCCTCACAGACAAGGATATAACAACAAGAGTAATTTCCTGTGAGATTAATCTTGAAGACACACCTTGTTCCAAGGTTATGACAAGAAATCCAGTATTTGTCATTACCGACACTCTTGCTGTGGAAGCGCTCCAAAAGATGGTGCAAGGGAGATTCAGACATTTACCTGTGGTGGAGAATGGAGAAGTGGTTGCTATCCTTGACATAGCAAAGTGTTTATATGATGCCATTGCCCGTATGGAAAGGGCAGCAGAGAAAGGAAAGGCAATTGCAGCGGCTGTTGAAGGCTCCAATTCATCATTCTTTGAGACTCTTCGGGAGCAGATATTTAAACCATCATTGTCTACAATCATTCCTGAGAATTCAAATGTTGTTACAGTCTCATCAAGAGACTCAGTTTTGACAACAACAAAAAAGATGCTTGAACTTCGTGGAAGTGCTGCTGTTGTGGTAGTTGATGGCAAACCTTGTGGTATCCTGACTTCAAGGGATATCTTGATGCGAGTAATAGCACAAAATCTCTCCCCATCGTCAACTCTTGTTGAGACGGTCATGACTCCAAATCCAGAATGTGCAGTAATCGACACACCAATTGTTGATGCACTTCACTTAATGCATAATGGAAAATTCTTGCATCTTCCTGTGGTTGATAGAGATGGCATTGTTGTTGCGACGGTTGATGTGATTCATATCACTCATGCTGCTGTAGCTACAGCTAGTCAGGCTGGGAATACTGCAAATCTGAACAATGAAGCTACCAACAGCATGATACAAAAGTTTTGGGATTCGACCATGACTTTAACTCCAAATGATGACGACGAAGATTCAAATAGCGACACTTCCTTTAAAATGGTTTCTGAGGGAGGAGAAACAGGGAGGTCCATTCCTTATAATGTGTCAAGCACGCAAACCACATTTTCCTTCAAACTACAAGATAAGAAGGGTAGATTGCATAGATTCACATGTGATACTCGGAGCATGACAGAGGTTATAACTTCCATCATTCAGAGAGTTGGCAATGATATTGACACCAATAACCTGCCCCAAATTTTGTATGAAGATGAAGAACACGATCAAGTTGTATTGGCTTCAGATAGTGATCTTGCAGCAGCCGTGGACCATGCAAAGACGGCTGGTTTGAAGGGATTGAGATTGCGCTTAGACTACTCAGGAGCATGTGGTTATGGAGCAGAATCAAGTTTAAATTTGGAATGTGCTAAGTCAGAAGCATGGGCTTCGGCCTTTCACACTGTAGCAGCTGGAGCTGCAGTTGTTGCAGCCTTAGGCCTATTAGCGTTCTTCAGGAAAATGCATTGA 1602 0.4388 MSSHGGSSRRSASFSGSPRRSKKKGSDFSLPDTTFRKPFPSMRTTIAGDRTVKSLRLSKALTVPESTTIYEACRRMAARRVDALLLTDSSALLCGILTDKDITTRVISCEINLEDTPCSKVMTRNPVFVITDTLAVEALQKMVQGRFRHLPVVENGEVVAILDIAKCLYDAIARMERAAEKGKAIAAAVEGSNSSFFETLREQIFKPSLSTIIPENSNVVTVSSRDSVLTTTKKMLELRGSAAVVVVDGKPCGILTSRDILMRVIAQNLSPSSTLVETVMTPNPECAVIDTPIVDALHLMHNGKFLHLPVVDRDGIVVATVDVIHITHAAVATASQAGNTANLNNEATNSMIQKFWDSTMTLTPNDDDEDSNSDTSFKMVSEGGETGRSIPYNVSSTQTTFSFKLQDKKGRLHRFTCDTRSMTEVITSIIQRVGNDIDTNNLPQILYEDEEHDQVVLASDSDLAAAVDHAKTAGLKGLRLRLDYSGACGYGAESSLNLECAKSEAWASAFHTVAAGAAVVAALGLLAFFRKMH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0828 533 MobiDBLite consensus disorder prediction 1 30 - -
Psa7g0828 533 ProSiteProfiles PB1 domain profile. 398 485 IPR000270 GO:0005515
Psa7g0828 533 Pfam PB1 domain 400 483 IPR000270 GO:0005515
Psa7g0828 533 Gene3D - 40 187 IPR046342 -
Psa7g0828 533 Gene3D - 190 343 IPR046342 -
Psa7g0828 533 Pfam CBS domain 120 162 IPR000644 -
Psa7g0828 533 Pfam CBS domain 58 103 IPR000644 -
Psa7g0828 533 Pfam CBS domain 276 327 IPR000644 -
Psa7g0828 533 Pfam CBS domain 216 262 IPR000644 -
Psa7g0828 533 CDD CBS_pair_MUG70_2 219 332 - -
Psa7g0828 533 CDD CBS_pair_MUG70_1 57 173 - -
Psa7g0828 533 SUPERFAMILY CBS-domain pair 49 165 IPR046342 -
Psa7g0828 533 MobiDBLite consensus disorder prediction 1 19 - -
Psa7g0828 533 SMART cbs_1 125 169 IPR000644 -
Psa7g0828 533 SMART cbs_1 59 107 IPR000644 -
Psa7g0828 533 SMART cbs_1 218 265 IPR000644 -
Psa7g0828 533 SMART cbs_1 283 331 IPR000644 -
Psa7g0828 533 ProSiteProfiles CBS domain profile. 280 338 IPR000644 -
Psa7g0828 533 SUPERFAMILY CBS-domain pair 217 329 IPR046342 -
Psa7g0828 533 SUPERFAMILY CAD & PB1 domains 395 488 - -
Psa7g0828 533 CDD PB1_MUG70 401 485 - -
Psa7g0828 533 SMART PB1_new 400 485 IPR000270 GO:0005515
Psa7g0828 533 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 33 521 - -
Psa7g0828 533 ProSiteProfiles CBS domain profile. 212 272 IPR000644 -
Psa7g0828 533 ProSiteProfiles CBS domain profile. 122 180 IPR000644 -
Psa7g0828 533 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED 33 521 IPR034896 -
Psa7g0828 533 ProSiteProfiles CBS domain profile. 56 116 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0828 Psa-Chr7 59788147 59795442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0828 - - gmx:100783514 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1216 5 94849282 94857127 Psa7g0828 7 59788147 59795442 PCT