Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0820 ATGATATCTGCACAGGCAGCAAGGTTTGACATTGTCAACCGATGCTCCTACACCGTGTGGCCAGCTGCCATTCCCCGCGGCGGCGGTGTACGGTTGGACCCCGGCCAAACATGGGGTCTAGACGTCCCAGCTGGAACCGCATCGGGCCGAGTTTGGGGCCGAACCGGGTGCCGTTTCGACAGCTCAGGCCGTGGTACTTGTCAAACCGGTGACTGCGGTGGTGTGCGTGGTTGCACCTTATCCGGTCAACCTCCGACCACACTTGCTGAGTTCACACTTAACGGCGGTTTTAATCTGGATTATATCAATCTATCTGTAATCGATGGTTTCAACGTTCCAATGCAATTTAGTGGATGCAACAAAGTGCTAAATTGTAGGGATTCTTCTTGCCCTGATGCTTATCATACACCCGTTGAAATCCTCTCACCAGATTTATTAGGCAATGGCACCATCGAAAGTCACTTGATATGCTGCTCAACGACAAGTTTCTACAATCGTTGA 501 0.511 MISAQAARFDIVNRCSYTVWPAAIPRGGGVRLDPGQTWGLDVPAGTASGRVWGRTGCRFDSSGRGTCQTGDCGGVRGCTLSGQPPTTLAEFTLNGGFNLDYINLSVIDGFNVPMQFSGCNKVLNCRDSSCPDAYHTPVEILSPDLLGNGTIESHLICCSTTSFYNR* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0820 166 PANTHER OS03G0233200 PROTEIN 2 137 IPR001938 -
Psa7g0820 166 Gene3D Thaumatin 8 158 IPR037176 -
Psa7g0820 166 SUPERFAMILY Osmotin, thaumatin-like protein 7 139 IPR037176 -
Psa7g0820 166 PANTHER THAUMATIN-LIKE PROTEIN 2 137 - -
Psa7g0820 166 CDD TLP-P 9 137 - -
Psa7g0820 166 PRINTS Pathogenesis-related protein signature 8 20 IPR001938 -
Psa7g0820 166 PRINTS Pathogenesis-related protein signature 28 37 IPR001938 -
Psa7g0820 166 PRINTS Pathogenesis-related protein signature 50 61 IPR001938 -
Psa7g0820 166 PRINTS Pathogenesis-related protein signature 63 92 IPR001938 -
Psa7g0820 166 PRINTS Pathogenesis-related protein signature 100 116 IPR001938 -
Psa7g0820 166 Pfam Thaumatin family 13 135 IPR001938 -
Psa7g0820 166 ProSiteProfiles Thaumatin family profile. 6 137 IPR001938 -
Psa7g0820 166 SMART tha2 9 143 IPR001938 -
Psa7g0820 166 ProSitePatterns Thaumatin family signature. 63 78 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0820 Psa-Chr7 59478414 59479985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0820 9 114 Receptor kinase-like Gene Family AT5G38280 42.241 7.74e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0820 - - mtr:MTR_8g096910 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4147 2 421278171 421279715 Psa7g0820 7 59478414 59479985 PCT