Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g4147 ATGGCAATCACCATGGAAAAAAGCCTCTTCATCTTCCTTTTCATAGCCATAACCTCCATAGCTTCAACACAAGCAGGAAATTTCAACATCACAAACAAGTGCAACTACACCGTCTGGGCCGCCGCGGTCCCCGGCGGCGGTGTAAAACTCAACACCGGCGAATCATGGAACATGAACATCGCAAACGGCACAAACAACGCAAGAATCTGGGGTCGAACCAATTGCACTTTCGACAACTCCGGCGTCGGAAAGTGCCAAACAGGAGATTGTAACAACACTCTTGAATGTAAAACATTCGGAACACCACCGAACACAATCCTAGAATTCGCTTTGAACATGTACAACAACCTCGATTTCTACGACGTTTCGCTTGTACAAGGTTTTAACATCCCAATTAAGTTGACACCTTCGTCAAGCTCTTGTGGCATGGTTAATTGTACTAGAAATATTACCGATGAGTGTCCTGCACAACTTAAGGTACCAGGTGGATGTAACAATCCTTGTACAACGTTTGGAACATCTGAATATTGTTGTGACTTAAGTTCTGCTAAATCTGTTGCTACAAATGCTTCTGCCACGTGTACTCCAACAAATTATTCTAAGTTCTTTAAGGATAGGTGTCCTTCTGCTTATAGTTACCCTAAAGATGATGCAACCAGCACTTATACTTGTATGGGAGGAACTACCTATGATGTTGTGTTTTGTCCTTAA 711 0.429 MAITMEKSLFIFLFIAITSIASTQAGNFNITNKCNYTVWAAAVPGGGVKLNTGESWNMNIANGTNNARIWGRTNCTFDNSGVGKCQTGDCNNTLECKTFGTPPNTILEFALNMYNNLDFYDVSLVQGFNIPIKLTPSSSSCGMVNCTRNITDECPAQLKVPGGCNNPCTTFGTSEYCCDLSSAKSVATNASATCTPTNYSKFFKDRCPSAYSYPKDDATSTYTCMGGTTYDVVFCP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 46 55 IPR001938 -
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 68 79 IPR001938 -
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 81 110 IPR001938 -
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 118 134 IPR001938 -
Psa2g4147 236 PRINTS Pathogenesis-related protein signature 226 235 IPR001938 -
Psa2g4147 236 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 2 236 - -
Psa2g4147 236 ProSiteProfiles Thaumatin family profile. 25 236 IPR001938 -
Psa2g4147 236 PANTHER OS03G0233200 PROTEIN 2 236 IPR001938 -
Psa2g4147 236 SUPERFAMILY Osmotin, thaumatin-like protein 28 236 IPR037176 -
Psa2g4147 236 SMART tha2 28 236 IPR001938 -
Psa2g4147 236 PIRSF PR5 1 236 IPR001938 -
Psa2g4147 236 Gene3D Thaumatin 26 236 IPR037176 -
Psa2g4147 236 Pfam Thaumatin family 32 236 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g4147 Psa-Chr2 421278171 421279715 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g4147 10 236 Receptor kinase-like Gene Family AT5G38280 36.546 1.06e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g4147 - - gmx:100037479 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4147 2 421278171 421279715 Psa2g4147 2 421278171 421279715 ECH
Psa2g4147 2 421278171 421279715 Psa7g0820 7 59478414 59479985 PCT