LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g0760	ATGGTTACTCGACGCTTCACTCAACTGCCAACCAGCGACGACGAAGACGATTATTCACCTCTTTCCAAGCCACACTCCACTTCAACAAACCTCGTCGACGATAACACTTCCAACCGTCGCAAAAGGAAGGTGCTGAACCTTCAAGACGACGACGATGAAGAAGAAGCTTCAAACGACAAAAAGATGAAGTTGAATGGTGATGATGATGATGAGGAGGAGGAAGAGGAAGCGTCCAGTGAAGAAGAGGAATCGCCATTGGAGGATGCTAAACCTGTTGGTGGACCGGTTAGGGTTTCTGGAAAAGGAAGAGGCAGAAAGAGTCATTTTCAGTCGTTTGAATTTGACAATAACTTATACACACTCGAGGATCCTGTGCTTCTTGTGCCTGAGGGTAAAGACCAAAAACCGTATGTGGCAATTGTTAAGGACATTACACAATCCCCAGATGGCAGTTTGAAGATCACAGGGCAGTGGTTTTACCGGCCAGATGAAGCGGCCAAAAAGGGAGGTGGTTGCTGGCAATCTAGTGACACCAGAGAGCTGTTTTATAGTTTCCACCGGGATGAGGTTCCTGCGGAATCTGTTATGCATAGGTGTGTGGTGCATTTTGTTCCCATACACAAACAGCTTCCAAATCGTAAGGAGCATCCTGGGTTTATTGTGCAAAAGGTTTATGACACAGTAGAAATGAAATTATGGAAGCTCACAGATAAAGACTATGAGGACAATAAACAAGCAGAAATTGACGAGCTTGTTCAGAAAACTTTTCAATGTTTGGGTGAGCTACCTGACATCGAGACTGATGCTCCTGCTGATCAGGAAGATCTGATTGGAAATAAAAGAATCTTAAAGAAAAAGAGTATTTCACCTCTTGATGTTTCAAGAGAGGACAGAACATCTCGAAGGAGTGTCCAACCTCTGAAACCTGAAACACCAAGGACTTGTTTAGCTAATACCTCAGAGCATTATCGTATATTAGTGAATTTTAATGCATTAACAGGTGATATCTATCGTGACAAAGGTTTGGTGAAGTTGCTTCAAAATGTTCAGTACTTGTTTGATACTGATGGCATCAGAAAGAAAAAAGACAAATGCAGTGACAGTTCTGATGCAACCAACAATCGAGGCACCAACAAAGGTTTAGAAATAGAAAATGAGTGTATAGACAAAGTTCTGAAGAATTCCAAGTCTTTTATCTGGCCAGATGTTGCTGTTCCAGCTGTAGTTGCTCTAGAGAATGCTTCACATGAAGCATTTTCATCAGATTATCAGAAGTACAGCCAAAAACTACGACAATTAGCATTTAATCTCAAGATCAATCCATTTCTGTTAAGCCGTCTATTAAATGGAGAGCTAGAAGCTTCAAAAATATTGACTATGACACCTACTGAATTGAAGGAGGGTTTGACTGCCGATGAAATATCCAAGAATGAACCTGACGAGCCACAACACATGCAGGTCATTTTTCACATGCAGATGACGGACACTCGCTGCAAACGTTGCACAGAGCAGAAGGTGGGCGTGAGGGATATTATCCGCGCAGGACACGTTGACCGATATATGCTGGAATGTATCGACTGTGGTTATTCCTGGTCTGCCTCTCGTGATGCGGTGTCTATGCTAACATTAGATGCATCAGATTCAAAAAGAAATGTAGGCACAGCCCCATGGGCCACTGCGAAATTTGAAAATGTGGAGAAGAAGCTAGTGAGTCCCCGTGAAACGGACAAGTCGGCCAATGACATCTTTATGCCGCCTGTATTGGAAGCCCATAAATCATTTGGCAAGTCGAGGAAAGATGAAAACATGGAAGCTTCAAAACGTGGTGACTAG	1833	0.4299	MVTRRFTQLPTSDDEDDYSPLSKPHSTSTNLVDDNTSNRRKRKVLNLQDDDDEEEASNDKKMKLNGDDDDEEEEEEASSEEEESPLEDAKPVGGPVRVSGKGRGRKSHFQSFEFDNNLYTLEDPVLLVPEGKDQKPYVAIVKDITQSPDGSLKITGQWFYRPDEAAKKGGGCWQSSDTRELFYSFHRDEVPAESVMHRCVVHFVPIHKQLPNRKEHPGFIVQKVYDTVEMKLWKLTDKDYEDNKQAEIDELVQKTFQCLGELPDIETDAPADQEDLIGNKRILKKKSISPLDVSREDRTSRRSVQPLKPETPRTCLANTSEHYRILVNFNALTGDIYRDKGLVKLLQNVQYLFDTDGIRKKKDKCSDSSDATNNRGTNKGLEIENECIDKVLKNSKSFIWPDVAVPAVVALENASHEAFSSDYQKYSQKLRQLAFNLKINPFLLSRLLNGELEASKILTMTPTELKEGLTADEISKNEPDEPQHMQVIFHMQMTDTRCKRCTEQKVGVRDIIRAGHVDRYMLECIDCGYSWSASRDAVSMLTLDASDSKRNVGTAPWATAKFENVEKKLVSPRETDKSANDIFMPPVLEAHKSFGKSRKDENMEASKRGD*	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g0760	610	Pfam	BAH domain	119	233	IPR001025	GO:0003682
	Psa7g0760	610	ProSiteProfiles	BAH domain profile.	117	236	IPR001025	GO:0003682
	Psa7g0760	610	CDD	BAH_plant_3	99	245	-	-
	Psa7g0760	610	Gene3D	-	358	467	IPR036575	GO:0006351
	Psa7g0760	610	SUPERFAMILY	Elongation factor TFIIS domain 2	402	466	IPR036575	GO:0006351
	Psa7g0760	610	PANTHER	BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN	1	607	-	-
	Psa7g0760	610	SMART	mid_6	370	475	IPR003618	GO:0006351
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	592	610	-	-
	Psa7g0760	610	ProSiteProfiles	TFIIS central domain profile.	383	493	IPR003618	GO:0006351
	Psa7g0760	610	SMART	BAH_4	117	236	IPR001025	GO:0003682
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	1	105	-	-
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	68	83	-	-
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	35	49	-	-
	Psa7g0760	610	PANTHER	BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN	1	607	-	-
	Psa7g0760	610	Gene3D	-	29	219	IPR043151	-
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	591	610	-	-
	Psa7g0760	610	MobiDBLite	consensus disorder prediction	292	313	-	-
	Psa7g0760	610	Pfam	Transcription factor S-II (TFIIS), central domain	334	481	IPR003618	GO:0006351

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g0760	Psa-Chr7	56087784	56092508	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g0760	-		-	cam:101501082	877.085

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g0760	7	56087784	56092508	Psa7g0760	7	56087784	56092508	ECH
	Psa2g4161	2	421631766	421635861	Psa7g0760	7	56087784	56092508	PCT