Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0577 ATGGTCTACTATAACAACAACTTGATTGGGACAATTGTTCTATTTGAAGTCATGGCCGCCCATGGATGCAAGAAGCTTGTGTTCTCCTCTTCAGCCACTGTATATGGTTGGCCAAAAAAAGTCCCTTGTACCGAAGAGTTCCCTTTATCAGCTGTAAACCCATATGGGCGAACCAAGCTTTATGTTGAAGAAATTTGTCGTGATATCTACCATGCAGATTCAGAATGGAAAATAACACTCTTGAGATACTTCAACCCAGTTGGTGCTCATCCTAGTGGTCACATTGGTGAGGATCCTCGCGGAATTCCTAACAACCTCATGCCTTTTGTTCAGCAAGTTGCAGTTGGCAGACGCCCCGCATTGACAGTTTTTGGAACAGATTATAGTACAAGTGATGGAACTGGAGTTCGTGATTATATTCATGTTGTTGATTTAGCAGATGGGCACATTGCTGCATTGCGTAAACTAGACGATCCTAAAACAGGTTGTGAGGTTTTCAACTTGGGAACAGGAAAGGGAACATCAGTCTTCGAGATGGTTACAGCTTTTGAAAAGGCCTCTGGAAAGAAAATTCCAATAGTAAAAGCTGGTAGGAGACCTGGAGATGCCGAAACTGTTTATGGGTCAACATCAAAAGCAGAAAAAGAACTTAACTGGAAAGCTAAGTATGGCATCGATGATATGTGCCGTGATCAATGGAATTGGGCTAGCAAAAACCCTTATGGCTATGGTGACTCTACAAAATGA 747 0.423 MVYYNNNLIGTIVLFEVMAAHGCKKLVFSSSATVYGWPKKVPCTEEFPLSAVNPYGRTKLYVEEICRDIYHADSEWKITLLRYFNPVGAHPSGHIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTSDGTGVRDYIHVVDLADGHIAALRKLDDPKTGCEVFNLGTGKGTSVFEMVTAFEKASGKKIPIVKAGRRPGDAETVYGSTSKAEKELNWKAKYGIDDMCRDQWNWASKNPYGYGDSTK* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0577 248 PANTHER UDP-GLUCOSE 4-EPIMERASE 1 2 246 - -
Psa7g0577 248 TIGRFAM galE: UDP-glucose 4-epimerase GalE 2 241 IPR005886 GO:0003978|GO:0006012
Psa7g0577 248 Gene3D - 1 90 - -
Psa7g0577 248 Gene3D - 143 247 - -
Psa7g0577 248 Gene3D - 91 142 - -
Psa7g0577 248 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 246 - -
Psa7g0577 248 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 243 IPR036291 -
Psa7g0577 248 CDD UDP_G4E_1_SDR_e 3 235 IPR005886 GO:0003978|GO:0006012
Psa7g0577 248 Pfam GDP-mannose 4,6 dehydratase 3 231 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0577 Psa-Chr7 38393153 38397105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g0577 3 220 Miscellaneous Gene Families AT4G00110 28.390 2.23e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0577 K01784 - zju:107429837 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g0577 7 38393153 38397105 Psa7g0577 7 38393153 38397105 ECH
Psa2g4239 2 423994965 423998803 Psa7g0577 7 38393153 38397105 PCT