Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g0021 ATGGGAATTTTATTTTCTAGAAATGTTTCTTTTAAATTTTTCTTGCCATTCCTTTTTTTCAATAGAATTTCTGGGAACTTATTCCCCAAGGAACTCCAGAATATGGTGTGTATGGTATCCCGCACCGGTAGAGATTTGCAACGCTACGATGATGATGGTTGTCGCCAAATCGTCGGATGCATTCCATATAGATATAGGAGAAAAGGAGTGCATAAGAATGAAATGGAGGTTCTGGTGATTAGTGCTCAGAATGGAAATGGAATGCAGTTTCCAAAGGGAGGTTGGGAGATTAATGAATCCATGGAGCAAGCTGCTTTAAGGGAGACCATAGAGGAAGCTGGAGTTATGGGAAATATTCAAAGTAAATTAGGTAAATGGTCTTATAAGAGCAAACGCCAAGATGTAGTACACGAGGGTTATATGTTTTCTTTGCTTGTCAAGAAGCAGTTAGATAATTGGCCAGAGAAGAACTTCCGGAAAAGAATTTGGATGAGTGTTAGTGAAGCCAAAGAAGTTTGTCCATATACTTGGATGAAGGAGGCTTTGGATGTATTGGTCAACAAGCAACCTCAATATTAA 579 0.3886 MGILFSRNVSFKFFLPFLFFNRISGNLFPKELQNMVCMVSRTGRDLQRYDDDGCRQIVGCIPYRYRRKGVHKNEMEVLVISAQNGNGMQFPKGGWEINESMEQAALRETIEEAGVMGNIQSKLGKWSYKSKRQDVVHEGYMFSLLVKKQLDNWPEKNFRKRIWMSVSEAKEVCPYTWMKEALDVLVNKQPQY* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g0021 192 SUPERFAMILY Nudix 38 188 IPR015797 -
Psa7g0021 192 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 38 188 - -
Psa7g0021 192 ProSiteProfiles Nudix hydrolase domain profile. 53 186 IPR000086 -
Psa7g0021 192 Pfam NUDIX domain 75 171 IPR000086 -
Psa7g0021 192 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 23 192 - -
Psa7g0021 192 CDD Nudix_Hydrolase_9 58 179 - -
Psa7g0021 192 ProSitePatterns Nudix box signature. 93 114 IPR020084 GO:0016787
Psa7g0021 192 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 23 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g0021 Psa-Chr7 635804 637466 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g0021 K07766 - gmx:100800531 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0683 1 44190724 44193873 Psa7g0021 7 635804 637466 ECH
Psa7g0021 7 635804 637466 Psa7g0021 7 635804 637466 ECH
Psa7g0021 7 635804 637466 Psa1g0683 1 44190724 44193873 PCT