Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g0683 ATGTCTGTTTCTTCCGCTTCTTCTTCATCATCTTCTCAAAATCATAATTTTCTTCTCATTCTCTCTTTCATTTTTCACATCAACAAAAAAAACAACAAAAACGTTGTAATGGGTCTTTTACTTTCAAGGAGTTTGGCTTGCAAGTTCTTTTACCCTTTGCTTTTCTCTAAGGATGTTCATAATGATTTCTTTCCTCAACAATTGGAAAACATGATCAGTTTGGTCTCTCCTCGAACTGGAAGACATTTGCAGCGATATGAAAAAGGGTGTCGCCAAGTTGTGGGATGCATACCTTACAGATACAAAAGCAATGGAACCCAAGAAAATGAAATAGAAGTTCTTTTGATTAGTGCTCAAAAGGGTAGTGGAATGCAATTCCCAAAGGGTGGTTGGGAAAGTGATGAATCCATGGAACAAGCTGCTTTGAGAGAAACCATAGAAGAAGCTGGGGTTATTGGAAGTGTTGAAAGTAATTTGGGTAAATGGTATTATAAGAGCAAAAGGCAACCCATTATGCATGAAGGATACATGTTTCCTTTGCTTGTTAGCAAGGAGTTGGATAATTGGCCAGAAATGAACTTAAGAAAAAGAAAATGGTTGAGTGTGGATGAAGCAAAAGAAATATGCCCATATGCATGGATGAAGGAAGCTTTAGATGAATTGGTTAGTAGACAAACAACCAATTCAATCTAA 693 0.368 MSVSSASSSSSSQNHNFLLILSFIFHINKKNNKNVVMGLLLSRSLACKFFYPLLFSKDVHNDFFPQQLENMISLVSPRTGRHLQRYEKGCRQVVGCIPYRYKSNGTQENEIEVLLISAQKGSGMQFPKGGWESDESMEQAALRETIEEAGVIGSVESNLGKWYYKSKRQPIMHEGYMFPLLVSKELDNWPEMNLRKRKWLSVDEAKEICPYAWMKEALDELVSRQTTNSI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g0683 230 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 77 225 - -
Psa1g0683 230 ProSitePatterns Nudix box signature. 129 150 IPR020084 GO:0016787
Psa1g0683 230 CDD Nudix_Hydrolase_9 92 215 - -
Psa1g0683 230 ProSiteProfiles Nudix hydrolase domain profile. 89 222 IPR000086 -
Psa1g0683 230 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 55 226 - -
Psa1g0683 230 Pfam NUDIX domain 108 219 IPR000086 -
Psa1g0683 230 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 55 226 - -
Psa1g0683 230 SUPERFAMILY Nudix 80 223 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g0683 Psa-Chr1 44190724 44193873 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g0683 K07766 - gmx:100527127 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g0683 1 44190724 44193873 Psa7g0021 7 635804 637466 ECH
Psa1g0683 1 44190724 44193873 Psa1g0683 1 44190724 44193873 ECH
Psa7g0021 7 635804 637466 Psa1g0683 1 44190724 44193873 PCT