Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4860 ATGGCCATGGTTTTGAAGTCAATGGCTGCTTCACCTGGAAATCTAACCCTTGTGAGACAACCTACTCACCATTTAGTTGATTTGAGTAACCGCGTTTCAAATCTTGGGTTTAGCTTCAAGGGAGATGAGAAATGGAAGAGAAAACATAGGGTTAAGGTTAGAGCAATAGTGGAAGTGGATGTAGAGGGTTTGAAAAGAAGAAGCAGTGTTTCATTGGAGGGAACTTTGGGGTTGGATATGGTTTCAGAAGGAGAGTTAATGGTGAAGGGTTTTAGAGGGTTGAGGAAGACAAAGCTTGTGTGTACGGTTGGTCCTGCTTGTAGTTCATTGGAGGATCTAGAGAAGATGGCATTGGGTGGAATGAATGTTGCTAGGCTTAATATGTGTCATGGGACTAGAGAATGGCACCGGGATGTGATTAGGAAGATTAAGAAGCTGAATGAGGAACAGGGTTTTGCGGTTTCTGTGATGATTGATACTGAGGGTAGTCAGATTCATGTTGTTGATCATGGAGAACCTTCCTCAGTTAAAGTTGAGGAAGATTCAATTTGGTTGTTTACTGCTGAACGGTTTGAAGGTACTCGTCCATTAACAGTTCAAGCAAGCTATCCAGGTTTCTCCGAAGGTATTGAAGTAGGCGACGAACTTGTTATTGATGGCGGAATGTCAAGCTTTGTAGTCATTGAAAAAATTGGAAATGATTTGAATTGTAAGTGTATAGACGCCGGTCTTTTCTTACCTGGTGCCAAATTTAGTTCCCGGAGAGATGGAAAGCTTGTAAAGAGGAATTACAAGCTCCCTACACTATCAACAAAGGATTGGGCTGACATTAACTTTGGTATAGCTGAGGAAGTTGATTTTTTTGCCTTATCCTTTGTCAATCATGCTGATTCTGTTAAGGATCTAAAGAACTACCTCTCTGGCAAATCAACCAAGCCCATAAAAGTATTGGCAAAGATAGAAAGCTTAGAATCTCTTCATAATCTAGAGGAAATAGTGAAAGCTTCTGATGGAATCATGGTTGCTCGTGGCGACCTCGGAGTCGAAATACCACTTGAACAGATTCCTACAGTCCAGGAGGGTATAATTCGTATTTGCAGACAACAAAATAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAGTATCCAACACCAACTCGCGCCGAGGTAGCGGATATTTCTGAAGCGGTTCGACAGTATGCCGATGCTTTGATGTTATCTGGCGAATCGGCTATCGGTTCATTTGGACAGAAAGCTTTGGCAGTGTTGGATATGACTAGCAGTAGAATGGAATCATGGAGTAGAAAAGAAAACAGACAAAGTCTTCTCAATCACCATAAACTCGGAGCATCATTGCCCGAATGCATCACGGAGCAAATATGCAATTGCGCGGTTGAAATGGCCAACAATCTCGGTGTAGATGCCATCTTTGTTTACACGAAGCATGGACACATGGCATCATTATTATCGCGCAACCGTCCTGATCCTCCCATCTTTGCTTTCACCGACGATGAAAATACACGAATGGCGCTGAATTTGCAATGGGGAGTTGTACCACTTCTTGTTGATTTATCAGACGAAGCTGAATCCAACATCTCGAAATCCGTCGATCTTATGAAATCGAAAGGACTGATCAACAAAGGAGATGTTGTTCTAGTGATCTCAGATGTTGCACCAACAAGAACAACTCCTATGGCTCTCCAATCAATTCAGGTTAAGAGCATTATCTAG 1743 0.4228 MAMVLKSMAASPGNLTLVRQPTHHLVDLSNRVSNLGFSFKGDEKWKRKHRVKVRAIVEVDVEGLKRRSSVSLEGTLGLDMVSEGELMVKGFRGLRKTKLVCTVGPACSSLEDLEKMALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEQGFAVSVMIDTEGSQIHVVDHGEPSSVKVEEDSIWLFTAERFEGTRPLTVQASYPGFSEGIEVGDELVIDGGMSSFVVIEKIGNDLNCKCIDAGLFLPGAKFSSRRDGKLVKRNYKLPTLSTKDWADINFGIAEEVDFFALSFVNHADSVKDLKNYLSGKSTKPIKVLAKIESLESLHNLEEIVKASDGIMVARGDLGVEIPLEQIPTVQEGIIRICRQQNKPVIVASQLLESMVEYPTPTRAEVADISEAVRQYADALMLSGESAIGSFGQKALAVLDMTSSRMESWSRKENRQSLLNHHKLGASLPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPDPPIFAFTDDENTRMALNLQWGVVPLLVDLSDEAESNISKSVDLMKSKGLINKGDVVLVISDVAPTRTTPMALQSIQVKSII* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4860 580 SUPERFAMILY PK C-terminal domain-like 456 563 IPR036918 -
Psa6g4860 580 PRINTS Pyruvate kinase family signature 152 168 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 285 299 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 316 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 343 367 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 368 392 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 393 411 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PRINTS Pyruvate kinase family signature 412 428 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 88 438 IPR015813 GO:0003824
Psa6g4860 580 Pfam Pyruvate kinase, barrel domain 95 436 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 Gene3D - 163 267 IPR015806 GO:0004743|GO:0006096
Psa6g4860 580 ProSitePatterns Pyruvate kinase active site signature. 314 326 IPR018209 GO:0004743|GO:0006096
Psa6g4860 580 Gene3D - 435 561 IPR036918 -
Psa6g4860 580 PANTHER PYRUVATE KINASE 39 579 - -
Psa6g4860 580 Pfam Pyruvate kinase, alpha/beta domain 462 561 IPR015795 -
Psa6g4860 580 SUPERFAMILY PK beta-barrel domain-like 165 246 IPR011037 -
Psa6g4860 580 TIGRFAM pyruv_kin: pyruvate kinase 95 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 PANTHER PYRUVATE KINASE 39 579 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa6g4860 580 Gene3D - 95 434 IPR040442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4860 Psa-Chr6 425431569 425435452 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4860 K00873 - gmx:100780644 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g4860 6 425431569 425435452 Psa6g4860 6 425431569 425435452 ECH
Psa2g3951 2 412782552 412787356 Psa6g4860 6 425431569 425435452 PCT