Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3951 ATGGCAACTGTTCATTTTTCTCCCCCTACGTCTCTCTTCAAATCCAACAATCTCAATCTCAATCTCAATTTCTCTTCCTCCATTTCCATCTCCCAACTTCCATTTCATTCTAACCCCCCATCCAAACGCTCACCCAAAACCCCCACCGTAACCTCCTCCACCGCCTCTCACACTAACTCTTCTTCGCCTTATTACCCCATCGAACCACATCAACAACGCACCAAAACTAAAATAGTCTGTACAATCGGTCCTTCCACCAGCTCACCTCACATGATTTCAAAACTCGCCCAAACCGGAATGAATGTTGCGCGTTTGAACATGTCACATGGAGATCACGCATCGCACCAGAAAACTATCGATTTCGTTAAACAATACAATTCTCTATTTCAAGACAGAGTTATTTCCATCATGCTTGACACCAAGGGTCCTGAAGTTAGAAGTGGGGATGTGCCCCAACCAATATTGCTCAAAGAGGGCCAAACTTTTCATTTCACTATTATCAGAGGGGTTTGCACTCAAGATACTGTTAGTGTCAATTATGATGATTTTATCAATGATGTCGACGATGGAGACGTACTTCTCGTTGACGGTGGAATGATGTCACTTGTTGTTAAGGCAAAGACACAAGACTTGGTTAAATGTGAAGTTATTGATGGGGGAGAACTGAAATCTAGGCGTCATTTGAATGTTCGTGGAAAAAGTGCAACACTCCCTTCTATAACTGAGAAGGACTGGGAAGATATTAAGTTTGGGGTGGATAATCAAGTAGACTTCTATGCTGTGTCATTTGTCAAGGATGCTAGAGTGGTTTACGAGTTAAAAGAATACCTCAAAAAACACAATGCTGATATACATGTCATTGTAAAAATTGAAAGTGCTGATTCCATACCAAATCTTCACTCTATACTTTCAGCTTCAGACGGGGCCATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCGATAGAAGATGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGTAACAGAATGCAAAAGCCAGTGATTGTGGCTACAAATATGCTTGAAAGCATGATTATTCATCCCACACCAACTAGAGCGGAAGTCTCAGACATTGCAATTGCAGTAAGACAAGGTGCCGATGCTGTCATGCTTTCAGGAGAAACTGCACATGGAAAATATCCACTGAAATCTGTTAAAGTTATGCATGCGGTGGCTCTGAGGAATGAATCCAGTGTTTTTAGAAGTGTTGCCTATCCAAATCATTTGAGTTTCCACAAGAGTCATATGGGAGAAATGTTTGCTTTCCATGCAACAACTATGTCTAACACTCTAAATACTCCTATTATCGTGTTCACCAGAACTGGATCCATGGCTATTCTTTTGAGCCATTATAGACCCCATTCAACAATATTTGCATTCACAAATGAAGGTAGGATTAAGCAAAGGATGGGACTTTATCATGGTGTTCTGCCTATATACATGCAATTTTCAAATGATTCAGAGGAGACCTTTGCTAGAGCCCTCAAGCTACTATTGAGTAAAGGTCATTTACAAGAGGGGCAATATGTTACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGCAAAGAATCCATTCATCATATCCAAGTTCGCGAGGTTCATGGATAA 1638 0.4139 MATVHFSPPTSLFKSNNLNLNLNFSSSISISQLPFHSNPPSKRSPKTPTVTSSTASHTNSSSPYYPIEPHQQRTKTKIVCTIGPSTSSPHMISKLAQTGMNVARLNMSHGDHASHQKTIDFVKQYNSLFQDRVISIMLDTKGPEVRSGDVPQPILLKEGQTFHFTIIRGVCTQDTVSVNYDDFINDVDDGDVLLVDGGMMSLVVKAKTQDLVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVYELKEYLKKHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEDVPLLQEDIIRRCNRMQKPVIVATNMLESMIIHPTPTRAEVSDIAIAVRQGADAVMLSGETAHGKYPLKSVKVMHAVALRNESSVFRSVAYPNHLSFHKSHMGEMFAFHATTMSNTLNTPIIVFTRTGSMAILLSHYRPHSTIFAFTNEGRIKQRMGLYHGVLPIYMQFSNDSEETFARALKLLLSKGHLQEGQYVTLVQSGAQPIWRKESIHHIQVREVHG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3951 545 Gene3D - 143 238 IPR015806 GO:0004743|GO:0006096
Psa2g3951 545 Gene3D - 405 523 IPR036918 -
Psa2g3951 545 ProSitePatterns Pyruvate kinase active site signature. 284 296 IPR018209 GO:0004743|GO:0006096
Psa2g3951 545 Pfam Pyruvate kinase, alpha/beta domain 433 523 IPR015795 -
Psa2g3951 545 Pfam Pyruvate kinase, barrel domain 75 409 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 SUPERFAMILY PK beta-barrel domain-like 143 234 IPR011037 -
Psa2g3951 545 PRINTS Pyruvate kinase family signature 132 148 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 256 270 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 286 312 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 313 337 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 338 362 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 363 381 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 PRINTS Pyruvate kinase family signature 382 398 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 SUPERFAMILY PK C-terminal domain-like 393 541 IPR036918 -
Psa2g3951 545 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 52 543 - -
Psa2g3951 545 Gene3D - 75 404 IPR040442 -
Psa2g3951 545 MobiDBLite consensus disorder prediction 35 72 - -
Psa2g3951 545 PANTHER PYRUVATE KINASE 52 543 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 TIGRFAM pyruv_kin: pyruvate kinase 75 540 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Psa2g3951 545 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 66 408 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3951 Psa-Chr2 412782552 412787356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3951 K00873 - gmx:100776984 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3951 2 412782552 412787356 Psa6g4860 6 425431569 425435452 PCT