Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa6g4559 ATGACAGATCAAGAGCAACCAAAAAAGGTAGAACCTGAATCAAGTTCTAATCCTTTATCAGCACCACCACCAAAGGAAGATGTGGCTCAGGAGAAATCTGTAATTCCACAACCTGATCATCTAGATCACAACCCTCCTCCTCCTCCGCCTGTTGTTGATGACTCCAAAGCTCTGGTTGTAGTTCCGAAGACCGAAGAAGCTGCTGAAGAGAAACCACAAGAGGGCTCTATCAACAGAGATGCGGTGCTTGAAAGAGTTGCAACAGAAAAGAGGCTGTCACTGGTCAAAGCATGGGAAGAAAGTGAAAAGTCTAAAGCAGAAAACAAAGCTCAGAGAAAACTGTCTACCATTACAGCATGGGAGAACAGTAAGAAAGCTGCAACAGAAGCTGAATTGAGAAAACTTGAGGAACAACTAGAGAGGAAAAAGGGAGAATATGCAGAGAAAATGAAGAACAAAATAGCACTACTTCACAAAAAAGCTGAAGAAAAAAGGGCTGTGATTGAGGCCAAGAAAGGGGAAGAGTTACTTAAAGCAGAGGAGGTGGCTGCAAAATACAGGGCAACTGGAACAGCTCCAAAGAAACTCTTTGGTTTATTCTAA 603 0.4279 MTDQEQPKKVEPESSSNPLSAPPPKEDVAQEKSVIPQPDHLDHNPPPPPPVVDDSKALVVVPKTEEAAEEKPQEGSINRDAVLERVATEKRLSLVKAWEESEKSKAENKAQRKLSTITAWENSKKAATEAELRKLEEQLERKKGEYAEKMKNKIALLHKKAEEKRAVIEAKKGEELLKAEEVAAKYRATGTAPKKLFGLF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa6g4559 200 Coils Coil 125 167 - -
Psa6g4559 200 MobiDBLite consensus disorder prediction 59 82 - -
Psa6g4559 200 Pfam Remorin, C-terminal region 90 195 IPR005516 -
Psa6g4559 200 Pfam Remorin, N-terminal region 26 86 IPR005518 -
Psa6g4559 200 PANTHER REMORIN 1.4 1 200 - -
Psa6g4559 200 MobiDBLite consensus disorder prediction 1 82 - -
Psa6g4559 200 PANTHER OS02G0117200 PROTEIN 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa6g4559 Psa-Chr6 397146213 397147888 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa6g4559 - - cam:101501168 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g4657 4 412914841 412917703 Psa6g4559 6 397146213 397147888 ECH
Psa3g2560 3 215795708 215796954 Psa6g4559 6 397146213 397147888 ECH
Psa2g4151 2 421367883 421369248 Psa6g4559 6 397146213 397147888 ECH
Psa7g0800 7 58262821 58264432 Psa6g4559 6 397146213 397147888 ECH
Psa6g4559 6 397146213 397147888 Psa6g4559 6 397146213 397147888 ECH